DRSC/TRiP Functional Genomics Resources

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Protein Alignment wun2 and Plpp3

DIOPT Version :9

Sequence 1:NP_524991.1 Gene:wun2 / 53558 FlyBaseID:FBgn0041087 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_620260.2 Gene:Plpp3 / 192270 RGDID:620454 Length:312 Species:Rattus norvegicus


Alignment Length:289 Identity:106/289 - (36%)
Similarity:156/289 - (53%) Gaps:32/289 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VDSTRSQGSLYAVASNKKPPLRGPRQIFGRILTDLCLLSCVGLPMLGFSLWGEAVK---RGFFCD 122
            |..:::.||   .|.|..|...|.:::. .|..||..|....||.|  .:....:|   |||:|:
  Rat    11 VPESKNGGS---PALNNNPRKGGSKRVL-LICLDLFCLFMAALPFL--IIETSTIKPYRRGFYCN 69

  Fly   123 DSSLRHPYRDS-TMPSWILYLMCGALPLTVMLVVEFFRGQDKRLHSPFPKSTMCSGYHLCHLELP 186
            |.|:::|.:.| |:...:|..:...:.:..::..||:|....:..|   :||:.:.|        
  Rat    70 DESIKYPLKVSETINDAVLCAVGIVIAILAIITGEFYRIYYLKEKS---RSTIQNPY-------- 123

  Fly   187 TWLVECYHRMGIFIFGLGVEQLSTNIAKYSIGRLRPHFYTLCQPVMKDGTTCSDPINAARYIEEF 251
              :...|.::|.|:||..:.|..|:|||.|||||||||.::|.|.... ..||:     .||:.:
  Rat   124 --VAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCDPDFSQ-INCSE-----GYIQNY 180

  Fly   252 TCAAVDITSKQLKDMRLSFPSGHASFACYSMLYLVIYLHRRMQWKQLRMLCHLLQFLLLMFAWYT 316
            .|...|   .::::.|.||.||||||:.::|||||:||..|..|:..|:|..||||.|||.|:||
  Rat   181 RCRGED---SKVQEARKSFFSGHASFSMFTMLYLVLYLQARFTWRGARLLRPLLQFTLLMMAFYT 242

  Fly   317 ALTRVSDYKHHWSDVLAGSGIGLTYAVVV 345
            .|:||||||||.||||||...|...|..:
  Rat   243 GLSRVSDYKHHPSDVLAGFAQGALVACCI 271

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
wun2NP_524991.1 PAP2_wunen 191..346 CDD:239479 74/155 (48%)