DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment wun2 and plppr2

DIOPT Version :9

Sequence 1:	NP_524991.1	Gene:	wun2 / 53558	FlyBaseID:	FBgn0041087	Length:	350	Species:	Drosophila melanogaster
Sequence 2:	XP_031755301.1	Gene:	plppr2 / 100485784	XenbaseID:	XB-GENE-6031106	Length:	358	Species:	Xenopus tropicalis

Alignment Length:	253	Identity:	64/253 - (25%)
Similarity:	107/253 - (42%)	Gaps:	50/253 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   117 RGFFCDDSSLRHPY----RDSTMPSWILYLMCGALPLTVMLVVEFFRGQDKRLHSPFPKSTMCSG 177
            :||||.||:|..||    ..|..|..:||.:...||:..:||.|.             .|.:..
Frog    60 QGFFCYDSTLSKPYPGPESTSRAPPRLLYPLIAILPILTILVGEV-------------TSVLID- 110

  Fly   178 YHLCHLELPTW-----LVEC-------------YHRMGIFIFGLGVEQLSTNIAKYSIGRLRPHF 224
                    |.|     ::.|             ...:|:|.|||....:.....:...|...|||
Frog   111 --------PRWKSRERVIACGDCCFFNPLLRRIVRILGLFSFGLFCTVIFAGAVQTVTGNQTPHF 167

  Fly   225 YTLCQPVMKDGTTCSDPINAARYIEEFTCAAVDITSKQLKDMRLSFPSGHASFACYSMLYLVIYL 289
            .::|:|    ..|....::..:|:........|  ...:.:.|.:|||..|:...|:.:|..:|:
Frog   168 LSVCRP----NYTALGCMSHIQYVSSPRACTGD--PDLIAEARKAFPSKPAALGAYAAVYTTMYV 226

  Fly   290 HRRMQWKQLRMLCHLLQFLLLMFAWYTALTRVSDYKHHWSDVLAGSGIGLTYAVVVTS 347
            ...::.|..|::...|.|.:|..:|..:|.||::|::||.|||||:.:|...||.:.:
Frog   227 TLVLRIKGSRLVKPSLCFAILSPSWLLSLLRVAEYRNHWRDVLAGTVVGSAIAVFLVT 284

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
wun2	NP_524991.1	PAP2_wunen	191..346	CDD:239479	43/167 (26%)
plppr2	XP_031755301.1	PAP2_wunen	134..283	CDD:239479	42/154 (27%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910