DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and TRIP6

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_003293.2 Gene:TRIP6 / 7205 HGNCID:12311 Length:476 Species:Homo sapiens


Alignment Length:536 Identity:131/536 - (24%)
Similarity:179/536 - (33%) Gaps:161/536 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 PP--PPAATAPKITQPSQVIEKFKPTPAPRSSGNMQQAPQQQQHPHPPSSSYYTQTESE------ 374
            ||  |..|.||:    .:.|.:..|.|.|.....:|..|:....|.|....|......|      
Human     8 PPKQPEPARAPQ----GRAIPRGTPGPPPAHGAALQPHPRVNFCPLPSEQCYQAPGGPEDRGPAW 68

  Fly   375 -----LLQ----IEAGGTGLTFASHSQRPESAISQVASTAHLDVPSAASSGSGGSAVSGGSGGAP 430
                 :||    :.|...||       ||.|.      .|.:|:.|:..     :.::||.|.|.
Human    69 VGSHGVLQHTQGLPADRGGL-------RPGSL------DAEIDLLSSTL-----AELNGGRGHAS 115

  Fly   431 ESAGRFV-----SPLQRRHC---QPPSHLPLNSVASPLRTASYKSAAAVAGHGFH---------- 477
            ....|..     .|..|...   .|.|.||.:....| ..|||.:|:..||..|.          
Human   116 RRPDRQAYEPPPPPAYRTGSLKPNPASPLPASPYGGP-TPASYTTASTPAGPAFPVQVKVAQPVR 179

  Fly   478 ----------------HSHHQQLDFQ-------RNSQSDDDSGCALEEYTWV--PPGL-----RP 512
                            ...|..|..:       ..||.:...| |.||...|  |.|.     ..
Human   180 GCGPPRRGASQASGPLPGPHFPLPGRGEVWGPGYRSQREPGPG-AKEEAAGVSGPAGRGRGGEHG 243

  Fly   513 DQVRLYFSQLPDDKVPYVNSPGEKYRVKQLLHQL--PPQDNEVRYCHSLSDEERKELRIFSAQRK 575
            .||.|  ||.|:|::..:        .|:|:|.:  ||..                         
Human   244 PQVPL--SQPPEDELDRL--------TKKLVHDMNHPPSG------------------------- 273

  Fly   576 REALGRGAVRLLSDERPCKGCEEPLSG-GDIVVFAQRLGAQLCWHPGCFVCSVCKELLVDLIYFQ 639
             |..|:           |.||.|.:.| |..||...|:     :|.||||||.|:..|....::.
Human   274 -EYFGQ-----------CGGCGEDVVGDGAGVVALDRV-----FHVGCFVCSTCRAQLRGQHFYA 321

  Fly   640 RDGNLYC-GRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQRY-IMREG 702
            .:...|| |.:.|..:|  |:.|.:.|. |....|.|:.:|...|.|..|...|.|..: :....
Human   322 VERRAYCEGCYVATLEK--CATCSQPIL-DRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATS 383

  Fly   703 KPYCLACFDTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCF--SCCTC-RCSLL------GR 758
            :.:|:..|...||..|..||..|..:.||  .:.....|.|:.|  .|..| .|.||      .:
Human   384 QIHCIEDFHRKFAPRCSVCGGAIMPEPGQ--EETVRIVALDRSFHIGCYKCEECGLLLSSEGECQ 446

  Fly   759 PFLPRRGTIYCSIACS 774
            ...|..|.|.|. |||
Human   447 GCYPLDGHILCK-ACS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 21/104 (20%)
LIM1_Prickle 593..651 CDD:188799 21/59 (36%)
LIM2_Prickle 656..711 CDD:188802 13/55 (24%)
LIM3_Prickle 716..774 CDD:188804 19/66 (29%)
TRIP6NP_003293.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 23/95 (24%)
Atrophin-1 <8..251 CDD:331285 61/268 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..253 35/148 (24%)
LIM1_TRIP6 279..332 CDD:188736 21/57 (37%)
LIM 339..398 CDD:295319 16/59 (27%)
LIM3_Zyxin_like 399..461 CDD:188743 19/64 (30%)
Interaction with MAGI1 and PTPN13. /evidence=ECO:0000269|PubMed:19017743 469..476
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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