DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and Trip6

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_001121042.1 Gene:Trip6 / 686323 RGDID:1583180 Length:480 Species:Rattus norvegicus


Alignment Length:507 Identity:117/507 - (23%)
Similarity:161/507 - (31%) Gaps:165/507 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 DIQLSDIEEQLARFDG---HSKRPPPPAATAPKITQPSQVIEKFKPTPAPRSSGNMQQAPQQQQH 359
            |.::..:...||..||   |:.|.|           ..|..|  .|.|.....|:::.:......
  Rat    94 DAEIDSLTSMLADLDGSRSHAPRRP-----------DRQAFE--APPPHAYRGGSLKPSGGAVPA 145

  Fly   360 PHPPSSSYYTQTESELLQIEAGGTGLTFASHSQRPESAISQVASTAHLDVPSAASSGSGGSAVSG 424
            |..|:|.|            .|.|..::|:.| .|......|.......|........|.|..||
  Rat   146 PMLPASPY------------GGPTPASYATAS-TPAGPAFPVQVKVAQPVRGCGLPRRGASQASG 197

  Fly   425 GSGGAPESAGRFVSPLQRRHCQPPSHLPLNSVASPLRTASYKS-----------AAAV---AGHG 475
                          ||      |..|.||.. ...:..|.|:|           ||.|   ||.|
  Rat   198 --------------PL------PGPHFPLTG-RGEVWGAGYRSHREPGPGVKEGAAGVHNPAGGG 241

  Fly   476 FHHSHHQQLDFQRNSQSDDDSGCALEEYTWVPPGLRPDQVRLYFSQLPDDKVPYVNSPGEKYRVK 540
            ....|.                         |.|  |      .||.|::::..:        .|
  Rat   242 RRGGHE-------------------------PQG--P------LSQPPEEELERL--------TK 265

  Fly   541 QLLHQL--PPQDNEVRYCHSLSDEERKELRIFSAQRKREALGRGAVRLLSDERPCKGCEEPLSG- 602
            :|:|.:  ||..                          |..||           |.||.:.:.| 
  Rat   266 KLVHDMNHPPSG--------------------------EYFGR-----------CGGCGDDVVGD 293

  Fly   603 GDIVVFAQRLGAQLCWHPGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCSACDEIIFS 667
            |..||...|:     :|.||||||.|:..|....::..:...||...:..|.: :||.|.|.|. 
  Rat   294 GAGVVALDRV-----FHTGCFVCSTCRAQLRGQHFYAVERRAYCESCYVATLE-KCSTCSEPIL- 351

  Fly   668 DECTEAEGRTWHMKHFACQECEHQLGGQRY-IMREGKPYCLACFDTMFAEYCDYCGEVIGVDQGQ 731
            |....|.|:.:|...|.|..|...|.|..: :....:.:|:..|...||..|..||..|..:.||
  Rat   352 DRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQ 416

  Fly   732 MSHDGQHWHATDQCF--SCCTC-RCSLL------GRPFLPRRGTIYCSIACS 774
              .:.....|.|:.|  .|..| .|.||      .:...|..|.|.|. |||
  Rat   417 --EETVRIVALDRSFHIGCYKCEECGLLLSSEGECQGCYPLDGHILCK-ACS 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 14/97 (14%)
LIM1_Prickle 593..651 CDD:188799 19/58 (33%)
LIM2_Prickle 656..711 CDD:188802 15/55 (27%)
LIM3_Prickle 716..774 CDD:188804 19/66 (29%)
Trip6NP_001121042.1 PHA03247 <3..256 CDD:223021 49/241 (20%)
LIM1_TRIP6 283..336 CDD:188736 19/57 (33%)
LIM 343..402 CDD:413332 18/59 (31%)
LIM3_Zyxin_like 403..465 CDD:188743 19/64 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.