DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and lpp

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_957492.1 Gene:lpp / 573024 ZFINID:ZDB-GENE-040426-918 Length:556 Species:Danio rerio


Alignment Length:552 Identity:117/552 - (21%)
Similarity:174/552 - (31%) Gaps:168/552 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 KDTEQLLEVDKSRRKANCYFNQAIADDIQLSDIEEQLARFDGHSKRPPPPAATAPKI-------- 328
            |..|:.||..:|...|......:|..|::.|  .....|...:|..|....:|||..        
Zfish   100 KGPEKTLEERRSSLDAEIDSLTSILADLESS--SPYKPRTQQNSASPAATGSTAPVTGYRRMVIP 162

  Fly   329 TQPSQVIEKFKPTPAPRSSGNM------QQAPQQQQHPHPPSSSYYT-QTESE---LLQIEAGGT 383
            |||.....| |.||.|::..|:      ...||.|..|.|..:||.| .|.|:   .:|:.|.. 
Zfish   163 TQPPLTATK-KSTPKPQAPQNVTPPASSSPRPQYQPAPQPVPASYTTASTPSQPTFNVQVRAAQ- 225

  Fly   384 GLTFASHSQRPESAISQVASTAHLDVPSAASSGSGG-------SAVSGG-----SGGAPESAGRF 436
                .:..|:|.....||   .::.....|...:.|       .|.|||     .||||...|  
Zfish   226 ----PAPQQQPVRGPGQV---QYMPAQPRAPEFAYGPPQPGFCPAPSGGYQDQHYGGAPGYGG-- 281

  Fly   437 VSPLQRRHCQPPSHLPLNSVASPLRTASYKSAAAVAGHGFHHSHHQQLDFQRNSQSDDDSGCALE 501
                |......|||.|     :|..:..|:.|                                 
Zfish   282 ----QNTWRAEPSHHP-----APTPSQGYQPA--------------------------------- 304

  Fly   502 EYTWVPPGLRPDQVRLYFSQLPDDKVPYVNSPGEKYR----------VKQLLHQL--PPQDNEVR 554
                 ||      .:.|.:..|....|:.......::          .|::|:.:  ||.:....
Zfish   305 -----PP------KKTYITDPPASLAPFAGGSSAPHKGRPEEELDRLTKKMLYDMDNPPSEEYFG 358

  Fly   555 YCHSLSDEERKELRIFSAQRKREALGRGAVRLLSDERPCKGCEEPLSGGDIVVFAQRLGAQLCWH 619
            .|.|..:               ..:|.|.           ||    :..|.|           :|
Zfish   359 RCSSCGE---------------NVVGEGT-----------GC----TAMDQV-----------FH 382

  Fly   620 PGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFA 684
            ..||:|..|...|....::..:...||...:..|.: .|:.|.:.|. :....|.|:.:|.:.|.
Zfish   383 VDCFICMTCGSKLRGKPFYAVEKKAYCEPCYINTLE-TCNICYKPIM-ERILRATGKAYHPQCFT 445

  Fly   685 CQECEHQLGGQRY-IMREGKPYCLACFDTMFAEYCDYCGEVIGVDQGQ--------MSHDGQHWH 740
            |..|...|.|..: :......:|:..|...||..|..|.|.|....||        :..|   :|
Zfish   446 CVVCHRSLDGIPFTVDASNHIHCIEDFHKKFAPRCSVCNEPIMPAPGQEETVRIVALDRD---FH 507

  Fly   741 ATDQCFSCCTCRCSLL---GRPFLPRRGTIYC 769
            .  ||:.|..|.|.|.   .:...|..|.:.|
Zfish   508 V--QCYRCEDCGCLLSEGDNQGCYPLDGHVLC 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 13/107 (12%)
LIM1_Prickle 593..651 CDD:188799 12/57 (21%)
LIM2_Prickle 656..711 CDD:188802 12/55 (22%)
LIM3_Prickle 716..774 CDD:188804 17/65 (26%)
lppNP_957492.1 DUF2413 123..>201 CDD:287302 22/80 (28%)
LIM1_TRIP6 360..413 CDD:188736 16/93 (17%)
LIM 420..479 CDD:295319 15/59 (25%)
LIM3_TRIP6 480..545 CDD:188820 17/63 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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