DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and lims1

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:XP_021335295.1 Gene:lims1 / 554019 ZFINID:ZDB-GENE-050522-236 Length:345 Species:Danio rerio


Alignment Length:365 Identity:80/365 - (21%)
Similarity:115/365 - (31%) Gaps:134/365 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 PDDKVPYVNSPGEKYRVK-----QLLHQLPP----QDNEVRYCHSLSDEERKELRIFSAQRKREA 578
            |.:|:  |||.||.|..:     |...|.|.    :....:||      |.....:|:       
Zfish    30 PAEKI--VNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYC------EHDFQMLFA------- 79

  Fly   579 LGRGAVRLLSDERPCKGCEEPLSGGDIVVFAQRLGAQLCWHPGCFVCSVCKELLVDL-------- 635
                         ||  |.:   .|:.::..........|||.||.|.:|:.:|.|:        
Zfish    80 -------------PC--CHQ---CGEFIIGRVIKAMNNSWHPDCFCCDICQAVLADVGFVKNAGR 126

  Fly   636 -------------------------------IYFQRD------------------------GNLY 645
                                           :.|:.|                        |.||
Zfish   127 HLCRPCHNREKARGLGKYICQKCHAIIEEQPLIFKNDPYHPDHFNCSNCGKELTADARELKGELY 191

  Fly   646 CGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCLACF 710
            |...|.:...|.|.||...| ......|.|:.||::||.|.:||....|.|:..|:|..||...:
Zfish   192 CLPCHDKMGVPICGACRRPI-EGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHY 255

  Fly   711 DTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFSCCTCRCSLLGRPFLPRRGTIYCSIACSK 775
            :.:|.:.|.:|..||..|  .:|...:.|..  .||||.||...|                    
Zfish   256 NQLFGDVCYHCNRVIEGD--VVSALNKAWCV--NCFSCSTCNTKL-------------------- 296

  Fly   776 GEPPTPSDTSSGPQLRPTHRASTSSQIAKSPRRGGERERD 815
                |..|......|:|..:........:..||..:||||
Zfish   297 ----TLKDRFVEVDLKPVCKHCYERLPEELKRRLAKRERD 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 15/73 (21%)
LIM1_Prickle 593..651 CDD:188799 18/120 (15%)
LIM2_Prickle 656..711 CDD:188802 20/54 (37%)
LIM3_Prickle 716..774 CDD:188804 14/57 (25%)
lims1XP_021335295.1 LIM1_PINCH 21..79 CDD:188717 14/56 (25%)
LIM2_PINCH 82..133 CDD:188718 11/53 (21%)
LIM3_PINCH 146..196 CDD:188719 6/49 (12%)
LIM4_PINCH 202..255 CDD:188720 20/53 (38%)
LIM5_PINCH 263..316 CDD:188721 18/80 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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