DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and lims2

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:XP_021334342.1 Gene:lims2 / 553696 ZFINID:ZDB-GENE-050522-56 Length:378 Species:Danio rerio


Alignment Length:281 Identity:80/281 - (28%)
Similarity:110/281 - (39%) Gaps:63/281 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 PDDKVPYVNSPGEKYR---------VKQLLHQLPPQDNEVRYCHSLSDEERKELRIFSA---QRK 575
            |.:|:  |||.||.|.         .:||:..|..:....:||      |.....:|:.   |..
Zfish    66 PTEKM--VNSNGELYHEQCFTCAQCFQQLIQGLFYEFEGRKYC------EHDFQMLFAPCCHQCG 122

  Fly   576 REALGRGAVRLLSDERP----CKGCEEPL-------SGGDIVV-------FAQRLGAQLC----- 617
            ...:||....:.|...|    |:.||..|       |||..:.       .|..||..:|     
Zfish   123 EFVVGRVIKAMNSSWHPDCFCCEVCEAVLADVGFVKSGGRPLCRSCH
SRQKALSLGKHVCQKCLC 187

  Fly   618 ------------WHPGCFVCSVC-KELLVDLIYFQRDGNLYCGRHHAETQKPRCSACDEIIFSDE 669
                        :||..|.||.| |||..|.  .:..|.|||...|.:...|.|.||...: ...
Zfish   188 VVEEPLMYRSDPYHPDHFNCSHCGKELTADA--RELKGELYCLPCH
DKLGVPICGACRRPV-EGR 249

  Fly   670 CTEAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCLACFDTMFAEYCDYCGEVIGVDQGQMSH 734
            ...|.|:.||::||.|.:||....|.|:..|:|..||...::.:|.:.|..|..||..|  .:|.
Zfish   250 VVNAMGKQWHVEHFVCVKCEKPFLGHRHYERKGLAYCETHY
NQLFGDVCFQCNRVIEGD--VVSA 312

  Fly   735 DGQHWHATDQCFSCCTCRCSL 755
            ..:.|..  :||||.||...|
Zfish   313 LNKAWCV--RCFSCSTCTSRL 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 18/76 (24%)
LIM1_Prickle 593..651 CDD:188799 25/89 (28%)
LIM2_Prickle 656..711 CDD:188802 19/54 (35%)
LIM3_Prickle 716..774 CDD:188804 14/40 (35%)
lims2XP_021334342.1 LIM1_PINCH 57..115 CDD:188717 14/56 (25%)
LIM2_PINCH 118..169 CDD:188718 12/50 (24%)
LIM3_PINCH 182..231 CDD:188719 15/50 (30%)
LIM4_PINCH 237..290 CDD:188720 19/53 (36%)
LIM5_PINCH 298..351 CDD:188721 14/38 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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