DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and prickle1

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:XP_012814522.1 Gene:prickle1 / 549693 XenbaseID:XB-GENE-486941 Length:871 Species:Xenopus tropicalis


Alignment Length:908 Identity:318/908 - (35%)
Similarity:428/908 - (47%) Gaps:263/908 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   432 SAGRFVSPLQRRHCQPPSHLPLNSVASPLRTASYKSAAAVAGHGFHHSHHQQLDFQRNSQSDDDS 496
            |:.|.:..|:|         |:.:|..||     :....::.|.|        ..||:|.|||||
 Frog    22 SSPRAIDELER---------PITTVYMPL-----EMDQKISKHTF--------GCQRSSTSDDDS 64

  Fly   497 GCALEEYTWVPPGLRPDQVRLYFSQLPDDKVPYVNSPGEKYRVKQLLHQLPPQDNEVRYCHSLSD 561
            |||:||||||||||||:||:|||:.||:.|||||||.|||.|:||||:||||.|||||||.|||:
 Frog    65 GCAMEEYTWVPPGLRPEQVQLYFACLPEAKVPYVNSVGEKCRIKQLLYQLPPHDNEVRYCQSLSE 129

  Fly   562 EERKELRIFSAQRKREALGRGAVRLLSD---ERPCKGCEEPLSGGDIVVFAQRLGAQLCWHPGCF 623
            ||:|||::||||||:||||||.:::||.   ...|:.|.|.::||:|.:|..|.|..:||||.||
 Frog   130 EEKKELQMFSAQRKKEALGRGNIKMLSRAVMHAMCEKCGEKINGGEIAIFVSRAGPGVCWHPSCF 194

  Fly   624 VCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFACQEC 688
            |||.|.|||||||||.:||.::|||||||..||||||||||||:|||||||||.|||.||:|.||
 Frog   195 VCSTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSACDEIIFADECTEAEGRHWHMNHFSCYEC 259

  Fly   689 EHQLGGQRYIMREGKPYCLACFDTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFSCCTCRC 753
            |..||||||||::|:|:|..||::.:||||:.|||.||||..||::||||||||:.||||..|:.
 Frog   260 ETVLGGQRYIMKDGRPFCCGCFESHYAEYCESCGEHIGVDHAQMTYDGQHWHATETCFSCAQCKV 324

  Fly   754 SLLGRPFLPRRGTIYCSIACSKGEPPTPSDTSSGPQLRPTHRASTSSQIAKSPRRG-GERERDPG 817
            ||||.||||::|.||||.|||.||....||:|..     ..:::.|.:..:|.|.| ..|..|..
 Frog   325 SLLGCPFLPKKGRIYCSKACSLGEDVHASDSSDS-----AFQSARSRESRRSVRMGKSSRSADQC 384

  Fly   818 RKA-------HHGHPKATGSAGDLLERQ------ERQRMEAAG---------------------- 847
            |::       ::..|..:|:|.|.|.|:      .||   .||                      
 Frog   385 RQSLLLSPALNYKFPGMSGNADDTLSRKMDDLSISRQ---GAGFDNDFWKARDEQETPEDHEEWA 446

  Fly   848 -----VADLLLGGGVPGMPRPA------------------------------------------- 864
                 :..|||..|..|:.:.|                                           
 Frog   447 EHDDYMTQLLLKFGEKGLFQQAPEDNRSNEHWMSDNIKGKNDLQRNSRNQSLASKKYQSDMYWAQ 511

  Fly   865 ------------HPPPID---LTELGI-----------------SLDNICAGDKSIFGDTQTLTN 897
                        ||.|..   |.||.:                 ||:  |..| ::....:.:.:
 Frog   512 SQDGLGDSAYGSHPGPASSRKLQELDMDHGASGYMHEKMPWYKRSLE--CLSD-NLKPQNENICD 573

  Fly   898 SMPDMLLSKADDS------------HSYQSIDKIN------------LNSPSNSDLTQSTQELAN 938
            ||..:.||....:            .|||:...:|            |||...:..|:|.:.|.:
 Frog   574 SMDSLALSNITGASVDRENKPRPSLFSYQNFQDLNTRDCEKMSNMGTLNSSMLNRSTESLKSLNS 638

  Fly   939 ELELDNEPVRELPHDGYEQLFANNRNQEHPAEQYDDEQLDN----------RPMKEVRFHSVQDT 993
            |:..:..|..|.|.  :......:::|..|..::.|:.:||          .||.|         
 Frog   639 EICQEKPPPEEKPM--HTSALRRSKSQTRPQVKFSDDVIDNGDCGSIDIRQPPMSE--------- 692

  Fly   994 MSRSKSYTDNSNARR----RRRRRNQSRSSSEMQI--------NQTNLRL--------------- 1031
            .||.:.|.....::|    |||:..:|||.:.:.:        .:.|.|.               
 Frog   693 RSRRRVYNFEERSQRPHHHRRRKSRKSRSENALHLATESKPSGRERNPRFYTAEDYEKLFHNRSA 757

  Fly  1032 HNAQTQVGTTPL-----NLLNN-------------LDNCDVASICSTCSSSSSSDMDDYVY---- 1074
            |..|..:....|     |..:|             |...|..|.|||||||||...::..:    
 Frog   758 HEVQAYIQNADLFGQYPNAASNFGLPSQVVDKFLGLYGEDEDSWCSTCSSSSSDSEEEGYFLGQP 822

  Fly  1075 ---RLPARKHYGGVRVAYVPNDALAYERKKKMAQDSSLAPGAGNASVGGAPAIMHESKNCTIS 1134
               .||.|..|....:. .|.:||:..:..:....|....|             |:.|||.||
 Frog   823 IPKPLPQRYQYFSDDLC-SPTNALSSSQFSQRTTKSKKKKG-------------HKGKNCIIS 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 73/95 (77%)
LIM1_Prickle 593..651 CDD:188799 34/57 (60%)
LIM2_Prickle 656..711 CDD:188802 41/54 (76%)
LIM3_Prickle 716..774 CDD:188804 39/57 (68%)
prickle1XP_012814522.1 PET_Prickle 60..156 CDD:193602 73/95 (77%)
LIM1_Prickle 164..222 CDD:188799 34/57 (60%)
LIM2_Prickle 227..282 CDD:188802 41/54 (76%)
LIM3_Prickle 287..345 CDD:188804 39/57 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 146 1.000 Domainoid score I4502
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 511 1.000 Inparanoid score I1284
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 1 1.000 - - FOG0001066
OrthoInspector 1 1.000 - - mtm14087
Panther 1 1.100 - - O PTHR24211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3342
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.100

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