DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and Lims1

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:XP_017457250.1 Gene:Lims1 / 499443 RGDID:1560732 Length:407 Species:Rattus norvegicus


Alignment Length:427 Identity:87/427 - (20%)
Similarity:134/427 - (31%) Gaps:177/427 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 RPDQVRLYFSQLPDDKV-------PYVNSPGEKYRVKQLLHQLPPQDNEVRYCHSLSDEERKELR 568
            |||.:|:  :.||::::       |:|           .|....|            :..|..|.
  Rat    21 RPDSLRV--NGLPEEELSSSVMITPFV-----------FLLLFSP------------NLRRITLH 60

  Fly   569 IFSAQRKREALGRGAVRLLSDERPCKGCEEPL-----SGGDIV-----------------VFAQR 611
            |:||.:.:.:....|:...:.|| |||..:|.     |.|::.                 :|.:.
  Rat    61 IYSAVKTKTSNMANALASATCER-CKGGFDPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEF 124

  Fly   612 LGAQLC------------------------------WHPGCFVCSVCKELLVDL----------- 635
            .|.:.|                              |||.||.|.:|:|:|.|:           
  Rat   125 EGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLC 189

  Fly   636 ----------------------------IYFQRD------------------------GNLYCGR 648
                                        :.|:.|                        |.|||..
  Rat   190 RPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLP 254

  Fly   649 HHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCLACFDTM 713
            .|.:...|.|.||...| ......|.|:.||::||.|.:||....|.|:..|:|..||...::.:
  Rat   255 CHDKMGVPICGACRRPI-EGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQL 318

  Fly   714 FAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFSCCTCRCSLLGRPFLPRRGTIYCSIACSKGEP 778
            |.:.|.:|..||..|  .:|...:.|..:  ||:|.||...|                       
  Rat   319 FGDVCFHCNRVIEGD--VVSALNKAWCVS--CFACSTCNTKL----------------------- 356

  Fly   779 PTPSDTSSGPQLRPTHRASTSSQIAKSPRRGGERERD 815
             |..|......|:|..:........:..||...|||:
  Rat   357 -TLKDKFVAIDLKPVCKYCYEKMPEELKRRLARRERE 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 16/83 (19%)
LIM1_Prickle 593..651 CDD:188799 25/172 (15%)
LIM2_Prickle 656..711 CDD:188802 20/54 (37%)
LIM3_Prickle 716..774 CDD:188804 13/57 (23%)
Lims1XP_017457250.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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