DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and fhl1a

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_001007288.1 Gene:fhl1a / 399646 ZFINID:ZDB-GENE-040206-1 Length:297 Species:Danio rerio


Alignment Length:214 Identity:62/214 - (28%)
Similarity:96/214 - (44%) Gaps:28/214 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   581 RGAVRLLSDERP-------------CKGCEEPLSGGDIVVFAQRLG-AQLCWHPGCFVCSVC-KE 630
            :|...:..|::|             |..|.:|: |.|    |:.|. ....||.|||.|:.| |.
Zfish    31 QGKKYVKKDDKPVCVRCFD
KLCANTCAECRKPI-GAD----AKELNHKNRHWHEGCFRCAKCYKP 90

  Fly   631 LLVDLIYFQRDGNLYCGRHHAETQKPRCSACDEIIFSDEC--TEAEGRTWHMKHFACQECEHQLG 693
            |..:....:.||.:.||:.......|||..|.::| :..|  .|.:.:.||.:.|.|.||:..:.
Zfish    91 LANEPFQAKDDGKIMCGKCG
DRDGSPRCQGCYKVI-TPGCKNVEYKHKVWHEECFTCFECKQPIR 154

  Fly   694 GQRYIMREGKPYCLACFDTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFSCCTCRCSLLGR 758
            .|.::.:....||..|.:..||::|..|.|.|  ..|.:::..|.||:  :||.|.||:..|.|.
Zfish   155 TQSFLTKGDDMYCTPCHEKKF
AKHCVRCKEAI--TSGGLTYQDQPWHS--ECFVCHTCKKPLAGA 215

  Fly   759 PFLPRRGTIYCSIACSKGE 777
            .|.......|| :.|.|.:
Zfish   216 RFTAHEDQFYC-VDCYKSD 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 1/6 (17%)
LIM1_Prickle 593..651 CDD:188799 20/59 (34%)
LIM2_Prickle 656..711 CDD:188802 17/56 (30%)
LIM3_Prickle 716..774 CDD:188804 18/57 (32%)
fhl1aNP_001007288.1 LIM <21..49 CDD:295319 3/17 (18%)
LIM1_FHL1 56..110 CDD:188730 20/58 (34%)
LIM2_FHL1 118..175 CDD:188808 15/57 (26%)
LIM3_FHL1 179..231 CDD:188813 19/56 (34%)
LIM4_FHL1 234..297 CDD:188734 62/214 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.