DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and LIMS1

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_001358423.1 Gene:LIMS1 / 3987 HGNCID:6616 Length:398 Species:Homo sapiens


Alignment Length:365 Identity:79/365 - (21%)
Similarity:116/365 - (31%) Gaps:134/365 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 PDDKVPYVNSPGEKYRVK-----QLLHQLPP----QDNEVRYCHSLSDEERKELRIFSAQRKREA 578
            |.:|:  |||.||.|..:     |...|.|.    :....:||      |.....:|:       
Human    81 PAEKI--VNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYC------EHDFQMLFA------- 130

  Fly   579 LGRGAVRLLSDERPCKGCEEPLSGGDIVVFAQRLGAQLCWHPGCFVCSVCKELLVDL-------- 635
                         ||  |.:   .|:.::..........|||.||.|.:|:|:|.|:        
Human   131 -------------PC--CHQ---CGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGR 177

  Fly   636 -------------------------------IYFQRD------------------------GNLY 645
                                           :.|:.|                        |.||
Human   178 HLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY 242

  Fly   646 CGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCLACF 710
            |...|.:...|.|.||...| ......|.|:.||::||.|.:||....|.|:..|:|..||...:
Human   243 CLPCHDKMGVPICGACRRPI-EGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHY 306

  Fly   711 DTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFSCCTCRCSLLGRPFLPRRGTIYCSIACSK 775
            :.:|.:.|.:|..||..|  .:|...:.|..  .||:|.||...|                    
Human   307 NQLFGDVCFHCNRVIEGD--VVSALNKAWCV--NCFACSTCNTKL-------------------- 347

  Fly   776 GEPPTPSDTSSGPQLRPTHRASTSSQIAKSPRRGGERERD 815
                |..|......|:|..:........:..||..:|||:
Human   348 ----TLKDKFVEIDLKPVCKHCYEKMPEEFKRRLAKRERE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 15/73 (21%)
LIM1_Prickle 593..651 CDD:188799 19/120 (16%)
LIM2_Prickle 656..711 CDD:188802 20/54 (37%)
LIM3_Prickle 716..774 CDD:188804 13/57 (23%)
LIMS1NP_001358423.1 LIM1_PINCH 72..130 CDD:188717 14/56 (25%)
LIM2_PINCH 133..184 CDD:188718 12/53 (23%)
LIM3_PINCH 197..247 CDD:188719 6/49 (12%)
LIM4_PINCH 253..306 CDD:188720 20/53 (38%)
LIM5_PINCH 314..367 CDD:188721 17/80 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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