DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and Fblim1

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:XP_008762495.1 Gene:Fblim1 / 362650 RGDID:1359551 Length:552 Species:Rattus norvegicus


Alignment Length:570 Identity:104/570 - (18%)
Similarity:182/570 - (31%) Gaps:205/570 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 DDLRNLNRCRNRNAVW----LNPKD--------------------------TEQLLEVDKSRRKA 287
            |.|:....|......:    |.|:|                          .|.::...:.:|.|
  Rat   122 DSLKGFQACWRAKETYFELLLGPRDRGSLQLSGAGLNFGPCLPVGISISAPQELIMASKQEKRVA 186

  Fly   288 NCYF--------NQAIADDIQLSDIEEQLARFDGHSKRPPPPAATAPKITQPSQVIEKFKP-TPA 343
            :..|        :.|:.:::..:..|.:.||          |..|.|..|..:.|....|. ||:
  Rat   187 SSVFITLAPPRRDVAVTEEVTQAVCEARRAR----------PWETLPTKTPGAAVGRSPKTWTPS 241

  Fly   344 PRSSGNMQQAPQQQQH-----PHPPSSSYYTQTESELLQIEAGGTGLTFASHSQRPESAISQVAS 403
            .|::.::.:.|.|..:     |.||    ..:.:.:||            .....|.|       
  Rat   242 GRTTASLPEVPPQLSNGGCSLPPPP----LNEEDLDLL------------PPPPPPPS------- 283

  Fly   404 TAHLDVPSAASSGSGGSAVSGGSGGAPESAGRFVSPLQRRHCQPPSHLPLNSVASPLRTASYKSA 468
             |:|.:|........||::              :|.|::.|..||...||  :.:|.:.:|    
  Rat   284 -AYLPLPEEEPPVVPGSSL--------------ISDLEQLHLPPPPPPPL--LQAPSKGSS---- 327

  Fly   469 AAVAGHGFHHSHHQQLDFQRNSQSDDDSGCALEEYTWVPPGLRPDQVRLYFSQLPDDKVPYVNSP 533
                                                 |.|  :|.|||....:||          
  Rat   328 -------------------------------------VQP--QPVQVRPSEEELP---------- 343

  Fly   534 GEKYRVKQLLHQLPPQDNEVRYCHSLSDEERKELRIFSAQRKREALGRGAVRLLSDERPCKGCEE 598
                         ||.:..|    :|.:.|                        :....|..|.:
  Rat   344 -------------PPPEEPV----TLPERE------------------------ASTDVCGFCHK 367

  Fly   599 PLSGGDIVVFAQRLGAQLCWHPGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCSACDE 663
            |:|..::.|.|.:..    :|..||.|..|:..|....::|:||...|...:.:|.: :|..|.|
  Rat   368 PVSPRELAVEAMKRQ----YHAQCFTCRTCRRQLAGQRFYQKDGRPLCEPCYQDTLE-KCGKCGE 427

  Fly   664 IIFSDECTEAEGRTWHMKHFACQECEHQLGGQRYIM-REGKPYCLACFDTMFAEYCDYCGEVI-- 725
            :: .:....|.|:.:|...|.|..|...:..:.:.: .:.:.||:..|...||..|..|...|  
  Rat   428 VV-QEHVIRALGKAFHPPCFTCVTCARCISDESFALDNQNQVYCVTDFYRKFAPVCSICENPIIP 491

  Fly   726 --GVDQGQMSHDGQHWHATDQCFSCCTCRCSLLGRP----FLPRRGTIYC 769
              |.|..::...|:::|  :.|:.|..|...|...|    ..|....::|
  Rat   492 RDGKDAFKIECMGRNFH--ENCYRCEDCSVLLSVEPTDQGCYPLNDHLFC 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 13/95 (14%)
LIM1_Prickle 593..651 CDD:188799 16/57 (28%)
LIM2_Prickle 656..711 CDD:188802 11/55 (20%)
LIM3_Prickle 716..774 CDD:188804 14/62 (23%)
Fblim1XP_008762495.1 LIM <357..415 CDD:295319 16/61 (26%)
LIM2_FBLP-1 422..474 CDD:188758 11/52 (21%)
LIM3_Zyxin_like 482..543 CDD:188743 14/60 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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