DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and lim-9

DIOPT Version :10

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_001300395.1 Gene:lim-9 / 3565712 WormBaseID:WBGene00006407 Length:793 Species:Caenorhabditis elegans


Alignment Length:608 Identity:188/608 - (30%)
Similarity:256/608 - (42%) Gaps:152/608 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 CRNRNAVWLNPKDTEQLLEVDKSRRKANCYFNQAIADDIQLSDIEEQLARFDGHSKRPPPPAATA 325
            |.::|.   ...|...:.|.:.::.|.:.|..:||       ||.|...|.:   ..||||.:::
 Worm    45 CYSKNT---EVVDIYDMPENNNAQEKEDHYTKRAI-------DIGETKKRLE---LLPPPPTSSS 96

  Fly   326 PKITQPSQVIEK---------------------FKPTPAP-----------RSSGNMQQAPQQQQ 358
            |:.|..:.:|:|                     :..||..           |..||.........
 Worm    97 PRPTSSNSIIQKSDGKRKDQKNEKQASPIIVEVYDDTPQSKMMLSTMNNPYRGGGNNNSNNNNSN 161

  Fly   359 H--------PHPPSSSYYTQTESELLQIEAGGTGLTFASHSQRPESAISQV--ASTA----HLDV 409
            |        ..|..|||  ..|:|..:.|..|..:.:....:..:.|..:|  |:||    :.::
 Worm   162 HGMVIEDVTDDPEYSSY--GNENEKPENEEEGAFVEYEKLDKTEDPAAFKVCQATTAVNRTYNNI 224

  Fly   410 -PSAASSGSGGSAVSGGS----------------GGA---------------------------- 429
             ||......|||..|.||                .||                            
 Worm   225 RPSYRMPIGGGSGSSSGSISREIRIESMNLTDVEDGARCRDKECHLGWKQHPWRKVCVHCKSDRS 289

  Fly   430 -----PESAGRFVSPLQRRHCQPPSHLPLNSVASPLRTASYKSAAAVAGHGFHHSHHQQLDFQRN 489
                 |..|   ::...|...|||:.:|.:.||.|       ......|||              
 Worm   290 DHELPPNQA---LNVYNRLGIQPPAGMPQSGVAEP-------EVPGSVGHG-------------- 330

  Fly   490 SQSDDDSGCALEEYTWVPPGLRPDQVRLYFSQLPDDKVPYVNSPGEKYRVKQLLHQLPPQDNEVR 554
                         |.||||||...:|..|.||||::.||..||.|||.|.||||.|||.||..|.
 Worm   331 -------------YAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQLLLQLPRQDLSVA 382

  Fly   555 YC-HSLSDEERKELRIFSAQRKREALGRGAVRL-LSDERPCKGCEEPLSGGDIVVFAQRLGAQLC 617
            || |..|..|||....|...|...||..|.|.. ::....|..|...|...::.|.|.:||....
 Worm   383 YCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEMAVIAPKLGDSTG 447

  Fly   618 WHPGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKH 682
            |||.||.|..|::|||||.|..:|..:||.||:||..|||||||||:||:.|.|:|..:.||..|
 Worm   448 WHPACFTCQACEQLLVDLTYCVKDNQIYCERHYAELHKPRCSACDELIFAGEYTKAMNKDWHSDH 512

  Fly   683 FACQECEHQLGGQRYIMREGKPYCLACFDTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFS 747
            |.|.:|:..|.|||||||:.:|||:.|::.:||..||.|.:.||:|...:|:..:|||  :.||.
 Worm   513 FCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPIGIDSKDLSYKDKHWH--EHCFL 575

  Fly   748 CCTCRCSLLGRPFLPRRGTIYCS 770
            |..|:.||:..||..:...|:||
 Worm   576 CSMCKISLVDMPFGSKNDRIFCS 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 44/97 (45%)
LIM1_Prickle 593..651 CDD:188799 25/57 (44%)
LIM2_Prickle 656..711 CDD:188802 31/54 (57%)
LIM3_Prickle 716..774 CDD:188804 21/55 (38%)
lim-9NP_001300395.1 PET_LIMPETin_LIM-9 329..412 CDD:193605 44/109 (40%)
LIM1_LIMPETin 423..480 CDD:188798 24/56 (43%)
LIM2_Testin_like 486..541 CDD:188727 31/54 (57%)
LIM3_LIMPETin 544..602 CDD:188805 23/57 (40%)
LIM4_LIMPETin 609..662 CDD:188809
LIM5_LIMPETin 670..721 CDD:188814
LIM6_LIMPETin 729..784 CDD:188816
Blue background indicates that the domain is not in the aligned region.

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