DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and Fhl3

DIOPT Version :10

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_001101449.1 Gene:Fhl3 / 313582 RGDID:1307180 Length:288 Species:Rattus norvegicus


Alignment Length:247 Identity:73/247 - (29%)
Similarity:107/247 - (43%) Gaps:47/247 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   554 RYC---HSLSDEERKELRIFSAQRKREALGRGAVRLLSDE-------RPCKGCEEPLSGGDIVVF 608
            |.|   .||:||.      |:.|..         .||.:|       ..|..|.|.:..|     
  Rat    67 RCCRCQRSLADEP------FTCQDS---------ELLCNECYC
TAFSSQCSACGETVMPG----- 111

  Fly   609 AQRL--GAQLCWHPGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCSACDEIIFSDECT 671
            :::|  |.| .||..||:||.|::.|....:....|..||...:.....|||:.|.:.:.....|
  Rat   112 SRKLEYGGQ-TWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYE
NKFAPRCARCSKTLTQGGVT 175

  Fly   672 EAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCLACFDTMFAEYCDYC---------GEVIGV 727
            ..: :.||.:...|..|:..|.||::..|:..|||:|||..:||..|..|         .|..|:
  Rat   176 YRD-QPWHRECLVCTGCQTPLAGQQFTSRDDDPYCVACF
GELFAPKCSSCKRPITGGSGSEGAGL 239

  Fly   728 DQGQ-MSHDGQHWHATDQCFSCCTCRCSLLGRPFLPRRGTIYCSIACSKGEP 778
            ..|: :|.:.:|||  ..||||..|..||:|:.|:|....:.|. .||:..|
  Rat   240 GGGKYVSFEDRHWH--HSCFSCARCSTSLVGQGFVPDGDQVLCQ-GCSQAGP 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 9/36 (25%)
LIM1_Prickle 593..651 CDD:188799 18/59 (31%)
LIM2_Prickle 656..711 CDD:188802 18/54 (33%)
LIM3_Prickle 716..774 CDD:188804 20/67 (30%)
Fhl3NP_001101449.1 LIM <5..33 CDD:413332
LIM1_FHL3 36..94 CDD:188807 11/41 (27%)
LIM2_FHL3 98..155 CDD:188811 18/62 (29%)
LIM3_FHL 162..213 CDD:188732 15/51 (29%)
LIM 221..284 CDD:413332 20/65 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.