DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and Lmcd1

DIOPT Version :10

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_659048.1 Gene:Lmcd1 / 30937 MGIID:1353635 Length:365 Species:Mus musculus


Alignment Length:243 Identity:91/243 - (37%)
Similarity:119/243 - (48%) Gaps:37/243 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 YTWVPPGLRPDQVRLYFSQLPDDKVPYVNSPGEKYRVKQLLHQLPPQDNEVRYCHSLSDEERKEL 567
            |.|.|||:.......|...:|.::.|...:.|..||.:||:||||..|.:...|..|.:.|.|.:
Mouse   118 YEWAPPGVTQKLGLQYMELIPKERQPVTGTEGALYRRRQLMHQLPIYDQDPSRCRGLVENELKAM 182

  Fly   568 RIFSAQRKREALGRGAVRL-----------LSDERPCKGCE--EPLSGGDI-------------- 605
            ..|....|.||||.|.|.|           .:.|:| :|.|  .|.:.|.:              
Mouse   183 EEFVKHYKSEALGVGEVALPGQGGLPKEENKTQEKP-EGTETTAPTTNGS
LGDPSKEVEYVCELC 246

  Fly   606 ---------VVFAQRLGAQLCWHPGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCSAC 661
                     ||:|.|.|....|||.||.|..|.|.|||||||.:||..:||||:.|:.:||||.|
Mouse   247 KGAAPVDSPVVYADRAGYSKQWHPTCFQCIKCSEPLVDLIYFWKDGAPWCGRHY
CESVRPRCSGC 311

  Fly   662 DEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCLAC 709
            ||||||::....|...||.|||.|:.||..|.|:.||:.:|:..|..|
Mouse   312 DEIIFSEDYQRVEDLAWHRKHFICEGCEQLLSGRAYIVTKGQLLCPTC 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 31/95 (33%)
LIM1_Prickle 593..651 CDD:188799 30/82 (37%)
LIM2_Prickle 656..711 CDD:188802 27/54 (50%)
LIM3_Prickle 716..774 CDD:188804
Lmcd1NP_659048.1 PET_testin 116..203 CDD:193604 31/84 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..231 6/31 (19%)
LIM1_Testin_like 243..300 CDD:188726 25/56 (45%)
LIM 306..359 CDD:413332 26/52 (50%)
Blue background indicates that the domain is not in the aligned region.

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