DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and LMCD1

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_055398.1 Gene:LMCD1 / 29995 HGNCID:6633 Length:365 Species:Homo sapiens


Alignment Length:245 Identity:93/245 - (37%)
Similarity:119/245 - (48%) Gaps:41/245 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 YTWVPPGLRPDQVRLYFSQLPDDKVPYVNSPGEKYRVKQLLHQLPPQDNEVRYCHSLSDEERKEL 567
            |.|.|||:.......|...:|.:|.|...:.|..||.:||:||||..|.:...|..|.:.|.|.:
Human   118 YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAFYRRRQLMHQLPIYDQDPSRCRGLLENELKLM 182

  Fly   568 RIFSAQRKREALGRGAVRL-----------LSDERP---------------------------CK 594
            ..|..|.|.||||.|.|.|           ...|:|                           ||
Human   183 EEFVKQYKSEALGVGEVALPGQGGLPKEEGKQQEKPEGAETTAATTNGSLSDP
SKEVEYVCELCK 247

  Fly   595 GCEEPLSGGDIVVFAQRLGAQLCWHPGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCS 659
            |...|.|.   ||::.|.|....|||.||||:.|.|.|||||||.:||..:||||:.|:.:||||
Human   248 GAAPPDSP---VVYSDRAGYNKQWHPTCFVCAKCSEPLVDLIYFWKDGAPWCGRHY
CESLRPRCS 309

  Fly   660 ACDEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCLAC 709
            .||||||:::....|...||.|||.|:.||..|.|:.||:.:|:..|..|
Human   310 GCDEIIFAEDYQRVEDLAWHRKHFVCEGCEQLLSGRAYIVTKGQLLCPTC 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 33/95 (35%)
LIM1_Prickle 593..651 CDD:188799 31/57 (54%)
LIM2_Prickle 656..711 CDD:188802 26/54 (48%)
LIM3_Prickle 716..774 CDD:188804
LMCD1NP_055398.1 PET_testin 116..203 CDD:193604 33/84 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..235 3/34 (9%)
LIM1_Testin_like 243..300 CDD:188726 30/59 (51%)
LIM 306..359 CDD:295319 25/52 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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