DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and LMCD1

DIOPT Version :10

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_055398.1 Gene:LMCD1 / 29995 HGNCID:6633 Length:365 Species:Homo sapiens


Alignment Length:245 Identity:93/245 - (37%)
Similarity:119/245 - (48%) Gaps:41/245 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 YTWVPPGLRPDQVRLYFSQLPDDKVPYVNSPGEKYRVKQLLHQLPPQDNEVRYCHSLSDEERKEL 567
            |.|.|||:.......|...:|.:|.|...:.|..||.:||:||||..|.:...|..|.:.|.|.:
Human   118 YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAFYRRRQLMHQLPIYDQDPSRCRGLLENELKLM 182

  Fly   568 RIFSAQRKREALGRGAVRL-----------LSDERP---------------------------CK 594
            ..|..|.|.||||.|.|.|           ...|:|                           ||
Human   183 EEFVKQYKSEALGVGEVALPGQGGLPKEEGKQQEKPEGAETTAATTNGSLSDP
SKEVEYVCELCK 247

  Fly   595 GCEEPLSGGDIVVFAQRLGAQLCWHPGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCS 659
            |...|.|.   ||::.|.|....|||.||||:.|.|.|||||||.:||..:||||:.|:.:||||
Human   248 GAAPPDSP---VVYSDRAGYNKQWHPTCFVCAKCSEPLVDLIYFWKDGAPWCGRHY
CESLRPRCS 309

  Fly   660 ACDEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCLAC 709
            .||||||:::....|...||.|||.|:.||..|.|:.||:.:|:..|..|
Human   310 GCDEIIFAEDYQRVEDLAWHRKHFVCEGCEQLLSGRAYIVTKGQLLCPTC 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 33/95 (35%)
LIM1_Prickle 593..651 CDD:188799 31/57 (54%)
LIM2_Prickle 656..711 CDD:188802 26/54 (48%)
LIM3_Prickle 716..774 CDD:188804
LMCD1NP_055398.1 PET_testin 116..203 CDD:193604 33/84 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..235 3/34 (9%)
LIM1_Testin_like 243..300 CDD:188726 30/59 (51%)
LIM 306..359 CDD:413332 25/52 (48%)
Blue background indicates that the domain is not in the aligned region.

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