DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and pxl1

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_596112.1 Gene:pxl1 / 2540856 PomBaseID:SPBC4F6.12 Length:438 Species:Schizosaccharomyces pombe


Alignment Length:444 Identity:108/444 - (24%)
Similarity:165/444 - (37%) Gaps:109/444 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 HSQRPESAISQVASTAHLDVPSAASSGSGG-------SAVSGG----SGG------------APE 431
            ||..||....:...|.....||:..|.:|.       |.:|.|    :||            .||
pombe     2 HSPIPELPRFERRLTGPRAAPSSPVSTNGSPLNNLVRSRLSDGALNFTGGRIATPLPQPSLKTPE 66

  Fly   432 SAGRFVSPLQRRHCQ----------PPSHLPLNSVASPLRTASYKSAAAVAGHGFHHSHHQQL-D 485
                  |||.:|:..          |...|..::|:||.:|....::.:.    |.....:.| :
pombe    67 ------SPLSKRNPTIKQNRVRFDLPDDELSRSNVSSPEKTLLTSASTST----FDSLKKELLPE 121

  Fly   486 FQRNSQSDDD----SGCALEEYTWVP---------PGLRP--------DQVRLYFS-QLP----- 523
            ....:.||||    |...|..:...|         .||:|        |:.:.:.| |||     
pombe   122 LPSLAYSDDDEFPSSPEELNSHVNYPDVRNVYDCHTGLQPLVDHDCIEDRQKTFASKQLPTLPLQ 186

  Fly   524 -----DDKVPYVNS----PGEK-YRVKQLLHQLPP--QDNEVRYCHSLSDEERKELRIFSAQRKR 576
                 .::.|.::|    |... |.:.....|||.  ..|.:....||     |...:.|....:
pombe   187 KSSKLSNRRPALHSFHSAPANSLYPLPTPTSQLPSNLSSNNLFQSDSL-----KPSMVSSHTSTK 246

  Fly   577 EALGRGAVRLLSDERPCKGCEEPLSGGDIVVFAQRLGAQLCWHPGCFVCSVCKELLVDLIYFQRD 641
            ..|.||     :.|:.|..|...|..|.|:   ...|.:|  ||.||.|..|.:.|..:.::.|:
pombe   247 PVLYRG-----NSEKSCHSCGGSLRAGRII---SASGKKL--HPQCFKCDTCSQNLEHVGFYYRE 301

  Fly   642 GNLYCGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFACQECEHQLG-GQRYIMREGKPY 705
            |..||...:.|...|||..|...| .|:........:|..|..|..|..... ....|.|:...:
pombe   302 GKFYCHLDYHEQFSPRCKHCKTPI-EDQAVHINNDWFHENHHFCAGCSEVFNVNIPCIYRDDLYW 365

  Fly   706 CLACFDTMFAEYCDYCGE-VIGVD-QGQMSHDGQHWHATDQCFSCCTCRCSLLG 757
            |..|:|..:|..|..|.: ::|:. :|.   ||: :|:  ||::|..|. :|||
pombe   366 CQTCYDNKYAVKCKKCRKPILGISVKGS---DGE-YHS--QCWTCGACN-ALLG 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 30/134 (22%)
LIM1_Prickle 593..651 CDD:188799 18/57 (32%)
LIM2_Prickle 656..711 CDD:188802 14/55 (25%)
LIM3_Prickle 716..774 CDD:188804 14/44 (32%)
pxl1NP_596112.1 LIM 258..314 CDD:278823 19/60 (32%)
LIM 318..370 CDD:259829 11/52 (21%)
LIM 378..428 CDD:259829 14/42 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47221
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
TreeFam 00.000 Not matched by this tool.
32.910

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