DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and Lpp

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_001139424.1 Gene:Lpp / 210126 MGIID:2441849 Length:613 Species:Mus musculus


Alignment Length:593 Identity:125/593 - (21%)
Similarity:189/593 - (31%) Gaps:192/593 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 DIQLSDIEEQLARFDGHSK-RPPPPAATAPKITQP----------SQVIEKFKP-TPAPRSSGNM 350
            |.::..:...||..:..|. :|.||..:|..|..|          ..||.:..| |...:|:...
Mouse   119 DAEIDSLTSILADLECSSPYKPRPPQGSASSIASPPVSTPVTGHKRMVIPQQPPLTATKKSATKP 183

  Fly   351 QQAPQQ-----------QQHPHPPSSSYYTQTESELLQIEAGGTGLTFASHSQRPESAISQVAST 404
            |.|||.           :..|.|..:||                  |.||.|.||         |
Mouse   184 QPAPQAAPIPVTPIGTLKPQPQPVPASY------------------TTASTSSRP---------T 221

  Fly   405 AHLDVPSAASSGSGGSAVSGGS--GGAPESAGRFVSPLQRRHCQPPSHLPLNSVASPLRTASYKS 467
            .::.|.||..|....:..|.|.  |..|........|:..: |.||          |....:..:
Mouse   222 FNVQVKSAQPSPHYMAGPSSGQIYGPGPRGYNNQPVPVSGQ-CPPP----------PTCVGTDYA 275

  Fly   468 AAAVAGH----GFHHSHHQQLDFQ----------RNSQSDDDSGCALEEYTW------VP----- 507
            ....:||    |:.::.:|...::          ..|:.|...|..::..||      .|     
Mouse   276 YIPPSGHPPESGYGYTSNQGRYYEPYYAAGPSYGGRSEGDTAYGQQVQPNTWKREAAYAPPASGN 340

  Fly   508 ---PGLRP----------DQVRL-----------YFSQLPDDKVPYVNSPGE--KYRVKQLLHQL 546
               ||:.|          |.|..           |...:....:|....|.:  ::..|::|:.:
Mouse   341 QNHPGMYPVSGPKKTYITDPVSAPCAPPLQPKGGYPGPMGPPSIPPSFRPEDELEHLTKKMLYDM 405

  Fly   547 --PPQDNEVRYCHSLSDEERKELRIFSAQRKREALGRGAVRLLSDERPCKGCEEPLSGGDIVVFA 609
              ||.|:....|               |:.....:|.|.           ||    :..|.|   
Mouse   406 ENPPADDYFGRC---------------ARCGENVVGEGT-----------GC----TAMDQV--- 437

  Fly   610 QRLGAQLCWHPGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCSACDEIIFSDECTEAE 674
                    :|..||.|.||...|....::..:...||...:..|.: :||.|.:.|. :....|.
Mouse   438 --------FHVDCFTCIVCDVKLRGQPFYAVEKKAYCEPCYINTLE-QCSVCSKPIM-ERILRAT 492

  Fly   675 GRTWHMKHFACQECEHQLGGQRYIMRE-GKPYCLACFDTMFAEYCDYCGEVIGVDQGQ------- 731
            |:.:|...|.|..|...|.|..:.:.. |..:|:..|...||..|..|.|.|....||       
Mouse   493 GKAYHPHCFTCVMCHRSLDGIPFTVDACGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIV 557

  Fly   732 -MSHDGQHWHATDQCFSCCTCRCSLL----GRPFLPRRGTIYCSIACSKGEPPTPSDTSSGPQLR 791
             :..| .|.|    |:.|..|. .||    .:...|..|.|.|.             |.:..::|
Mouse   558 ALDRD-FHVH----CYRCEDCG-GLLSEGDNQGCYPLDGHILCK-------------TCNSARIR 603

  Fly   792 P-THRAST 798
            . |.:|||
Mouse   604 VLTAKAST 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 22/134 (16%)
LIM1_Prickle 593..651 CDD:188799 13/57 (23%)
LIM2_Prickle 656..711 CDD:188802 14/55 (25%)
LIM3_Prickle 716..774 CDD:188804 18/69 (26%)
LppNP_001139424.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..119 125/593 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 133..259 35/152 (23%)
PRK14971 <139..>240 CDD:237874 30/127 (24%)
dnaA 192..>388 CDD:237605 41/233 (18%)
LIM1_TRIP6 417..470 CDD:188736 17/93 (18%)
LIM 477..536 CDD:351770 17/59 (29%)
LIM 537..602 CDD:351770 19/83 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.