DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esn and Lims1

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:XP_006513131.1 Gene:Lims1 / 110829 MGIID:1195263 Length:398 Species:Mus musculus


Alignment Length:455 Identity:95/455 - (20%)
Similarity:143/455 - (31%) Gaps:153/455 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 PLQRRHCQPPSH--LPLNSVASPLRTASYKSAAAVAGHGFHHS----HHQQLDFQRNSQSDDDSG 497
            |.:.|.|..|.:  :|..::.|.|.....:...||:.....||    :.:..||.......:...
Mouse     4 PGRARPCTIPENEEIPQTALNSVLEANGNEDERAVSNLQRRHSDVKVYKEFCDFYAKFNMANALA 68

  Fly   498 CALEEYTWVPPGLRPDQVRLYFSQLPDDKVPYVNSPGEKYRVK-----QLLHQLPP----QDNEV 553
            .|..|             |......|.:|:  |||.||.|..:     |...|.|.    :....
Mouse    69 SATCE-------------RCKGGFAPAEKI--VNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGR 118

  Fly   554 RYCHSLSDEERKELRIFSAQRKREALGRGAVRLLSDERPCKGCEEPLSGGDIVVFAQRLGAQLCW 618
            :||      |.....:|:                    ||  |.:   .|:.::..........|
Mouse   119 KYC------EHDFQMLFA--------------------PC--CHQ---CGEFIIGRVIKAMNNSW 152

  Fly   619 HPGCFVCSVCKELLVDL---------------------------------------IYFQRD--- 641
            ||.||.|.:|:|:|.|:                                       :.|:.|   
Mouse   153 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYH 217

  Fly   642 ---------------------GNLYCGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFAC 685
                                 |.|||...|.:...|.|.||...| ......|.|:.||::||.|
Mouse   218 PDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPI-EGRVVNAMGKQWHVEHFVC 281

  Fly   686 QECEHQLGGQRYIMREGKPYCLACFDTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFSCCT 750
            .:||....|.|:..|:|..||...::.:|.:.|.:|..||..|  .:|...:.|..:  ||:|.|
Mouse   282 AKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGD--VVSALNKAWCVS--CFACST 342

  Fly   751 CRCSLLGRPFLPRRGTIYCSIACSKGEPPTPSDTSSGPQLRPTHRASTSSQIAKSPRRGGERERD 815
            |...|                        |..|......|:|..:........:..||..:|||:
Mouse   343 CNTKL------------------------TLKDKFVEIDLKPVCKYCYEKMPEEFKRRLAKRERE 383

  Fly   816  815
            Mouse   384  383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 18/104 (17%)
LIM1_Prickle 593..651 CDD:188799 19/120 (16%)
LIM2_Prickle 656..711 CDD:188802 20/54 (37%)
LIM3_Prickle 716..774 CDD:188804 13/57 (23%)
Lims1XP_006513131.1 LIM1_PINCH 72..130 CDD:188717 16/78 (21%)
LIM2_PINCH 133..184 CDD:188718 12/53 (23%)
LIM3_PINCH 197..247 CDD:188719 6/49 (12%)
LIM4_PINCH 253..306 CDD:188720 20/53 (38%)
LIM5_PINCH 314..367 CDD:188721 17/80 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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