DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and lims1

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:XP_012812021.1 Gene:lims1 / 100216119 XenbaseID:XB-GENE-967923 Length:397 Species:Xenopus tropicalis


Alignment Length:305 Identity:69/305 - (22%)
Similarity:102/305 - (33%) Gaps:110/305 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 PDDKVPYVNSPGEKYRVK-----QLLHQLPP----QDNEVRYCHSLSDEERKELRIFSAQRKREA 578
            |.:|:  |||.||.|..:     |...|.|.    :....:||      |.....:|:       
 Frog    82 PSEKI--VNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYC------EHDFQMLFA------- 131

  Fly   579 LGRGAVRLLSDERPCKGCEEPLSGGDIVVFAQRLGAQLCWHPGCFVCSVCKELLVDL-------- 635
                         ||  |.:   .|:.::..........|||.||.|.:|:::|.|:        
 Frog   132 -------------PC--CHQ---CGEFIIGRVIKAMNNSWHPECFRCDICQQVLADIGFVKNAGR 178

  Fly   636 -------------------------------IYFQRD------------------------GNLY 645
                                           :.|:.|                        |.||
 Frog   179 HLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY 243

  Fly   646 CGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCLACF 710
            |...|.:...|.|.||...| ......|.|:.||::||.|.:||....|.|:..|:|..||...:
 Frog   244 CLPCHDKMGVPICGACRRPI-EGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHY 307

  Fly   711 DTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFSCCTCRCSL 755
            :.:|.:.|.:|..||..|  .:|...:.|..  .||:|.||...|
 Frog   308 NQLFGDVCFHCNRVIEGD--VVSALNKAWCV--NCFACSTCNTKL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 15/73 (21%)
LIM1_Prickle 593..651 CDD:188799 18/120 (15%)
LIM2_Prickle 656..711 CDD:188802 20/54 (37%)
LIM3_Prickle 716..774 CDD:188804 13/40 (33%)
lims1XP_012812021.1 LIM1_PINCH 73..131 CDD:188717 14/56 (25%)
LIM2_PINCH 134..185 CDD:188718 11/53 (21%)
LIM3_PINCH 198..248 CDD:188719 6/49 (12%)
LIM4_PINCH 254..307 CDD:188720 20/53 (38%)
LIM5_PINCH 315..368 CDD:188721 13/38 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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