DRSC/TRiP Functional Genomics Resources

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Protein Alignment esn and prickle4

DIOPT Version :9

Sequence 1:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster
Sequence 2:NP_001120115.1 Gene:prickle4 / 100145136 XenbaseID:XB-GENE-5812313 Length:438 Species:Xenopus tropicalis


Alignment Length:490 Identity:155/490 - (31%)
Similarity:228/490 - (46%) Gaps:82/490 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 SPLRTASYKSAAAVAGHGFHHSHHQQLDFQRNSQSDDDSGCALEEYTWVPPGLRPDQVRLYFSQL 522
            ||..|:  ||.|..|                 |.||.|||||:|:::                  
 Frog     7 SPATTS--KSTARTA-----------------SSSDSDSGCAIEDFS------------------ 34

  Fly   523 PDDKVPYVN------SPGEKYRVKQLLHQLPPQDNEVRYCHSLSDEERKELRIFSAQRKREALGR 581
             |.:|| .|      ...|...::.|||.|||||.:.|:|.:..:.||:||:.|.|||:..::..
 Frog    35 -DLEVP-ANLTLAECGAQELKIIRTLLHLLPPQDCDERFCTAFGEHERRELQKFIAQRRLHSMRH 97

  Fly   582 GAVRLLSDERP---CKGCEEPLSGGDIVVFAQRLGAQ-LCWHPGCFVCSVCKELLVDLIYFQRDG 642
            |.:..::.|.|   |..|...:..||..|.::::..: |.||.|||.|..|...|:..|||.:||
 Frog    98 GVIVPVTQETPDTFCVRCHGQIGVGDTAVQSEQVQDEGLRWHLGCFACETCHLPLLQFIYFLQDG 162

  Fly   643 NLYCGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQRYIMREGKPYCL 707
            .:||||||||..:.||:|||::|.|::|..|||..|||:||.|.|||:.|||.||:|:.|:|:|.
 Frog   163 RIYCGRHHAELSRSRCAACDQLILSEKCIVAEGHCWHMEHFCCWECENVLGGHRYVMKGGRPFCK 227

  Fly   708 ACFDTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFSCCTCRCSLLGRPFLPRRGTIYCSIA 772
            .||..::||.|:.|||.:..|...::..||:|||...||.|..||.||....|:...|.|:|| .
 Frog   228 GCFLRLYAENCEACGEPVDPDGDIVAFRGQYWHALPSCFCCSNCRISLQRSQFMVTNGQIFCS-P 291

  Fly   773 CSKGEPPTPSDTSSGPQLRPTHRASTSSQIAKSPRRGGERERDPGRKAHH--GHP--KATGSAGD 833
            |:.|.          .|:....|..|     |||.|...::.:....:.|  ||.  ||..:...
 Frog   292 CATGV----------SQILSNQRCFT-----KSPTRLSSQQYNLQWDSSHYQGHQGYKAAVAINI 341

  Fly   834 LLERQERQRMEAAGVADLLLGGGV--PGMPRPAHPPPIDLTELGISLDNICAGDKSIFGDTQT-- 894
            .::       ::..:.|...|..|  ..:....|.|.:......:..|:|.....|...|::.  
 Frog   342 SMK-------DSCSITDCHEGCSVLCRDITNNKHFPRLHGPNDAVEDDSISYSSSSTSSDSEPEG 399

  Fly   895 --LTNSMPDMLLSKADDSHSYQSIDKINLNSPSNS 927
              |...:|:..||:...|...|..:.:.....|.|
 Frog   400 FFLGTPIPNYSLSRQSPSPMCQKNNSLKRRQISKS 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 32/101 (32%)
LIM1_Prickle 593..651 CDD:188799 24/58 (41%)
LIM2_Prickle 656..711 CDD:188802 30/54 (56%)
LIM3_Prickle 716..774 CDD:188804 23/57 (40%)
prickle4NP_001120115.1 PET 20..103 CDD:384194 33/102 (32%)
LIM 112..170 CDD:351770 23/57 (40%)
LIM 177..230 CDD:351770 29/52 (56%)
LIM3_Testin_like 238..291 CDD:188728 22/53 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 1 1.000 - - FOG0001066
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24211
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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