DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT1G27420

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_174062.1 Gene:AT1G27420 / 839632 AraportID:AT1G27420 Length:346 Species:Arabidopsis thaliana


Alignment Length:424 Identity:108/424 - (25%)
Similarity:158/424 - (37%) Gaps:135/424 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 VMESEEFLLLPVGQLVDI--ICSDELNVRSEEQVFNAV-MSWLKYNVAERRQHLAQVLQHVRLPL 265
            |:||....::| |...|:  :|..:: .||..|:.:.| ..|..:   .|.||.|.|        
plant     2 VVESSSSPIIP-GLTDDVAELCVSKI-PRSSFQITSQVCRRWRSF---LRSQHFAAV-------- 53

  Fly   266 LSPKFLVGTVGSDLLVRSDEAC-RD----LVDEAKNYL--LLPQERPLMQGPRTRPRKPTRRGEV 323
               :.|.|||...|.|..:..| ||    :.|.:.|.|  :.|...||.:|...   .....|::
plant    54 ---RKLTGTVEEFLCVLMESECGRDVYWEVFDASGNKLGQIPPVPGPLKRGFGV---AVLDGGKI 112

  Fly   324 LFAVGGWC----SG------DAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHD 378
            :| .||:.    ||      .|.|.|..|||..|.|:.:|.|:..|.....|.:|.|||.:.|:.
plant   113 VF-FGGYTEVEGSGINSTTVSASADVYEFDPANNSWRKLAGMNIPRYNFAFAEVNGLLYVIRGYS 176

  Fly   379 GQSY-LNSIERYDPQTNQWS---CDVAPTTSCRTSVGVAVLDGF-------LYAVGGQDGVQCLN 432
            ..:| |::.|.|:|:|||||   |...|           |..||       |||||...     .
plant   177 TDTYSLSNAEVYNPKTNQWSLMHCPNRP-----------VWRGFAFAFSSKLYAVGNGS-----R 225

  Fly   433 HVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPM 497
            .::.||||...|.::                                         |...:||..
plant   226 FIDIYDPKTQTWEEL-----------------------------------------NSEQSVSVY 249

  Fly   498 STRRKHLGCAVFNNYIYAVGGRDDCMELSSAER---YNPLTNTWSPIVAMTSRRSG--VGLAVVN 557
            |       ..|..|.:|       .|:.:...|   ::|..|:||. |.:..|..|  |.|.|.|
plant   250 S-------YTVVRNKVY-------FMDRNMPGRLGVFDPEENSWSS-VFVPPREGGFWVRLGVWN 299

  Fly   558 GQLYAVGGFDGSAYLKTIEVYD---PETNQWRLC 588
            .::.......|...|    :||   .:.::||:|
plant   300 NKVLLFSRVCGHETL----MYDLDKEKGSKWRVC 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 106/421 (25%)
KELCH repeat 359..403 CDD:276965 18/47 (38%)
KELCH repeat 407..451 CDD:276965 13/50 (26%)
KELCH repeat 454..497 CDD:276965 3/42 (7%)
KELCH repeat 501..545 CDD:276965 10/46 (22%)
KELCH repeat 548..593 CDD:276965 12/46 (26%)
AT1G27420NP_174062.1 F-box_AtAFR-like 10..54 CDD:438923 14/59 (24%)
NanM 78..306 CDD:442289 75/303 (25%)
KELCH repeat 100..153 CDD:276965 16/56 (29%)
KELCH repeat 157..202 CDD:276965 18/44 (41%)
KELCH repeat 205..242 CDD:276965 13/82 (16%)
Blue background indicates that the domain is not in the aligned region.

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