DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT1G22040

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_173623.1 Gene:AT1G22040 / 838809 AraportID:AT1G22040 Length:475 Species:Arabidopsis thaliana


Alignment Length:294 Identity:80/294 - (27%)
Similarity:120/294 - (40%) Gaps:79/294 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 DPQTNDWKMVAPM-------SKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 400
            ||.:..|:.:.||       ..|:...|:..:....:.||. ..:|:|.   |.|      |.:.
plant   114 DPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGA-IVRSFLG---RRD------SSEQ 168

  Fly   401 APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGF 465
            .|...|    .:..:||.||.:||....:.::.|.|:||..|.||:|:.|...|......||...
plant   169 MPFCGC----AIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSKTGVLNKK 229

  Fly   466 LYAIGGSD----GQCPLNTVERYDPRHNKWVAVSPMSTRRKHL---------------GCAVFNN 511
            ||.:||.|    |..||.:.|.|||..:.|..|..|...:..:               |...:|.
plant   230 LYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSMPFSKAQVLPNAFLADLLKPIATGMTCYNG 294

  Fly   512 ------------YIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTS--------RRSGVGLA-V 555
                        :...|||          |.|:|.||.|   |.|.|        |::|..|: |
plant   295 RLCVPQSLYSWPFFVDVGG----------EVYDPETNLW---VEMPSGMGEGWPARQAGTKLSVV 346

  Fly   556 VNGQLYAVGGFDGSAYLKT--IEVYDPETNQWRL 587
            |:|:|||   ||.|:.::.  |:|||.:.:.|::
plant   347 VDGELYA---FDPSSSMENGKIKVYDQKEDTWKV 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 80/292 (27%)
KELCH repeat 359..403 CDD:276965 8/43 (19%)
KELCH repeat 407..451 CDD:276965 14/43 (33%)
KELCH repeat 454..497 CDD:276965 17/46 (37%)
KELCH repeat 501..545 CDD:276965 12/70 (17%)
KELCH repeat 548..593 CDD:276965 16/43 (37%)
AT1G22040NP_173623.1 F-box_AtAFR-like 43..87 CDD:438923
NanM <111..231 CDD:442289 34/130 (26%)
KELCH repeat 172..214 CDD:276965 15/45 (33%)
NanM 175..384 CDD:442289 64/219 (29%)
KELCH repeat 218..266 CDD:276965 17/47 (36%)
KELCH repeat 269..328 CDD:276965 13/71 (18%)
KELCH repeat 336..378 CDD:276965 17/45 (38%)
Blue background indicates that the domain is not in the aligned region.

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