DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dbo and AT1G19470

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_173379.1 Gene:AT1G19470 / 838531 AraportID:AT1G19470 Length:412 Species:Arabidopsis thaliana


Alignment Length:406 Identity:82/406 - (20%)
Similarity:137/406 - (33%) Gaps:118/406 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 SDEACRDLVDEAKNYLLLPQERPLMQGPRTRPR------KPTRRGE-----VLFAVGGWCSGDAI 336
            |::.|    |..|.    |:|:.|.:..|...|      ||....|     |.|.:....:...:
plant    11 SNDGC----DPNKK----PEEQVLRRSRRIATRNENQNKKPKEEEEEDNRSVSFPIPNELTEACV 67

  Fly   337 ASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERY------DPQTN- 394
            |.:.:.     |:..::.:|        :...:|:.:.|.::.:|.|...|.:      .|.|| 
plant    68 ALIRKC-----DYPSLSSVS--------SYFFNLIASSGLYETRSRLGLSETFLYAAIKFPDTNP 119

  Fly   395 -------------------------QWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHV 434
                                     .|.|.|       .:||..     :|.:||...::.|..:
plant   120 ANWYILHRNKVSSLRLTEVGSLPPVPWGCSV-------VTVGQE-----MYVIGGLLDIRRLQLM 172

  Fly   435 ERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCP-LNTVERYDPRHNKWVAVSPMS 498
            ...|.:.:|...:..|...|...|..|:.|.:|.|||...:.| ...:|.:|.:...|.:: |..
plant   173 TLIDCRTHKCRSLPSMKRGRYKAAAGVVDGKIYVIGGFRMRKPDAEWIEVFDLKTQIWESL-PGP 236

  Fly   499 TRRKHLGC-----AVFNNYIYAVGGRDDCMELSSAERYNPLTN-TWSPIVAMTSRRS--GVGLAV 555
            ..|...|.     ||..:.:|.:|.: .|:.      |.|..| .|...|..|..:.  .....|
plant   237 YPRTSAGSQFSAHAVMEDKLYMLGSK-FCLV------YEPKRNGEWDASVGATPLKDLWDKTCCV 294

  Fly   556 VNGQLYAVGGFDGSAYL-KTIEVYDPETNQWR------LCGCMNY-------RRLGGGVGVMRAP 606
            |:..||..   |....| ..|.||.|:...||      |....:|       ...||.:.::.:.
plant   295 VDDMLYTT---DPRRTLGHPIVVYHPKDKTWRPVKGESLWSLPSYFFSKSEMANFGGKLVILGSN 356

  Fly   607 QT--------ENYMWC 614
            ::        |..:||
plant   357 KSYVTGDCIGEKGIWC 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 75/362 (21%)
KELCH repeat 359..403 CDD:276965 11/75 (15%)
KELCH repeat 407..451 CDD:276965 8/43 (19%)
KELCH repeat 454..497 CDD:276965 12/43 (28%)
KELCH repeat 501..545 CDD:276965 12/49 (24%)
KELCH repeat 548..593 CDD:276965 13/53 (25%)
AT1G19470NP_173379.1 F-box_SF 57..98 CDD:459239 5/53 (9%)
NanM 136..325 CDD:442289 50/211 (24%)
KELCH repeat 147..188 CDD:276965 10/52 (19%)
KELCH repeat 192..236 CDD:276965 13/44 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.