DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT5G49000

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001119398.1 Gene:AT5G49000 / 834959 AraportID:AT5G49000 Length:372 Species:Arabidopsis thaliana


Alignment Length:167 Identity:37/167 - (22%)
Similarity:66/167 - (39%) Gaps:30/167 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 AVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDC 522
            ::..:|..:||||||....|.:.|...|.|.:.|.....|..:|.:....|.:..||..||.::.
plant   124 SIVAIGSNIYAIGGSIENAPSSKVSILDCRSHTWHEAPSMRMKRNYPAANVVDGKIYVAGGLEEF 188

  Fly   523 MELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEVYDPETNQWRL 587
            ......|.::..|.||..:::..:.|......|:.|::|..|        ..:..|.|:.::|  
plant   189 DSSKWMEVFDIKTQTWEFVLSPLAERFIYRSLVIEGEIYIFG--------DKVVTYKPKEDRW-- 243

  Fly   588 CGCMNYRRLGGGVGVMRAPQ----------TENYMWC 614
                      ||||..::..          .:|.::|
plant   244 ----------GGVGEHQSMDLGLFFHSYCVIDNVLYC 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 31/128 (24%)
KELCH repeat 359..403 CDD:276965
KELCH repeat 407..451 CDD:276965
KELCH repeat 454..497 CDD:276965 12/38 (32%)
KELCH repeat 501..545 CDD:276965 10/43 (23%)
KELCH repeat 548..593 CDD:276965 8/44 (18%)
AT5G49000NP_001119398.1 F-box 24..66 CDD:279040
KELCH repeat 121..163 CDD:276965 12/38 (32%)
Kelch 132..177 CDD:128874 14/44 (32%)
KELCH repeat 167..212 CDD:276965 10/44 (23%)
Kelch_1 167..207 CDD:279660 10/39 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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