DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT5G48980

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_199709.1 Gene:AT5G48980 / 834957 AraportID:AT5G48980 Length:399 Species:Arabidopsis thaliana


Alignment Length:397 Identity:76/397 - (19%)
Similarity:141/397 - (35%) Gaps:109/397 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 HLAQVLQHVRLPLLSPKF-----LVGTVGSDLLVRSDEACRDLVDEA--KNYLLLPQERPLMQGP 310
            :|:.|.:..|..|.||:.     |:|...:.|.|     |....|||  :.:.|..:....:...
plant    54 NLSLVSKSFRSILTSPELYKTRTLLGKTENFLYV-----CLRFPDEANPRWFTLYRKPNQTLTDH 113

  Fly   311 RTRPRKPTRRGEVLFAVGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVG 375
            .|:.:|..::.|...:|      :.:|.:...:....:|.            .:..::..|||:.
plant   114 TTKKKKKKKKKEEKSSV------NLLAPISILNSHPVEWS------------AIISVDHYLYAIS 160

  Fly   376 GHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPK 440
            ....::..:::...|.:|:.|  :.||  ..|.:...:..:|.:|..|..:....||.||.|:..
plant   161 ADIEKAPYSNVPYLDCRTHTW--NEAP--RMRLAHTNSEFEGIVYLPGSFESPDSLNCVEVYNTM 221

  Fly   441 ENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVER--------YDPRHNKWVAVSPM 497
            ...|..|.|  .:|:                    ..|..:|:        .|.|..|.::   :
plant   222 TQTWKPVPP--EKRM--------------------FKLENLEKKIYYKSFHLDSRAGKGLS---L 261

  Fly   498 STRRKHLGCAV-----FNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVN 557
            |.:.|||.|.:     .::|:     |..||..:.|..|......|.            ||   :
plant   262 SYKSKHLTCGLVVLDTVDSYL-----RSSCMIENIAYFYRKGNFIWR------------GL---D 306

  Fly   558 GQLYAVGGFDGSAYLKTIEVYDPETNQWRLCGCMNYRRLGGGVGVM------RAPQTENYMWC-E 615
            |::...|..:|...|       |:.:::.......|   ||.:.|:      .:...|..:|| |
plant   307 GKILVYGKIEGLEGL-------PKFSRYSSVQLAEY---GGKLVVLWDKYVPASGYKEKMIWCAE 361

  Fly   616 NSFKQPN 622
            .|.::.|
plant   362 ISLEKRN 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 66/353 (19%)
KELCH repeat 359..403 CDD:276965 7/43 (16%)
KELCH repeat 407..451 CDD:276965 12/43 (28%)
KELCH repeat 454..497 CDD:276965 6/50 (12%)
KELCH repeat 501..545 CDD:276965 11/48 (23%)
KELCH repeat 548..593 CDD:276965 7/44 (16%)
AT5G48980NP_199709.1 F-box 34..75 CDD:279040 6/20 (30%)
KELCH repeat 148..187 CDD:276965 8/42 (19%)
Kelch_1 187..230 CDD:279660 11/42 (26%)
KELCH repeat 188..230 CDD:276965 11/41 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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