DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dbo and NSP5

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_568692.1 Gene:NSP5 / 834871 AraportID:AT5G48180 Length:326 Species:Arabidopsis thaliana


Alignment Length:335 Identity:74/335 - (22%)
Similarity:118/335 - (35%) Gaps:112/335 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 PQTNDWKMVAPMSKRRCGVG------VAVLNDLLYAVGGH-------DGQSYLNSIERYDPQTNQ 395
            |..|.|..|   .::..|.|      :.|:.:.:|..||.       |...|:     :|.:|.:
plant     3 PVENKWLKV---GQKGAGPGARSSHAMTVVGNKVYCFGGELKPTIHIDNDLYV-----FDLETQE 59

  Fly   396 WSCDVAPTTS-----CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVAPMTTRRL 455
            ||  :||.|.     | ..|.:..:...:|..||:|..:..|.:..||.:.|:|..:||:.....
plant    60 WS--IAPATGEAPFPC-FGVSMVTIGSTIYVYGGRDDKRRYNGLHSYDTETNEWKLLAPVEEGLP 121

  Fly   456 GVAVAVLGG---FLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVG 517
            |.:...:.|   .:|..||...:..:||:..||....|||.                    |...
plant   122 GRSYHSMAGDDRKVYVFGGVTAKGRVNTLHAYDVVDQKWVE--------------------YPAA 166

  Fly   518 GRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEVYDPET 582
            | :.|                       ..|...||.||.|:::.:.||||:. |..|..:|..:
plant   167 G-EAC-----------------------KGRGAPGLVVVEGRIWVLFGFDGNE-LGDIHCFDLAS 206

  Fly   583 NQWR-------------LCGCMNYRR----LGG----------GVGVMRAP----QTENYMW--- 613
            .||:             :...::|.:    .||          |.|.|...    .||..:|   
plant   207 EQWKAVETTGDVPAARSVFPAVSYGKYIVIYGGEEEPHELMHMGAGKMSGEVYQLDTETLVWERI 271

  Fly   614 -CENSFKQPN 622
             |.|..::|:
plant   272 VCGNEEEKPS 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 62/276 (22%)
KELCH repeat 359..403 CDD:276965 13/56 (23%)
KELCH repeat 407..451 CDD:276965 12/43 (28%)
KELCH repeat 454..497 CDD:276965 12/45 (27%)
KELCH repeat 501..545 CDD:276965 3/43 (7%)
KELCH repeat 548..593 CDD:276965 15/57 (26%)
NSP5NP_568692.1 PLN02193 <3..319 CDD:177844 74/335 (22%)
KELCH repeat 21..69 CDD:276965 13/54 (24%)
KELCH repeat 73..121 CDD:276965 13/48 (27%)
KELCH repeat 123..162 CDD:276965 10/38 (26%)
KELCH repeat 173..219 CDD:276965 15/46 (33%)
KELCH repeat 222..271 CDD:276965 9/48 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.