DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT5G39560

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_198772.2 Gene:AT5G39560 / 833952 AraportID:AT5G39560 Length:403 Species:Arabidopsis thaliana


Alignment Length:416 Identity:91/416 - (21%)
Similarity:147/416 - (35%) Gaps:120/416 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 AVMSWLKYNVAERRQHLAQVLQ--HVRLPLLSPKFLVGTVGSDLL--VRSD----EACRDLVDEA 294
            ::|| |.|.:.|  ..||::.:  :..|.|:|..|| ..:.|..|  .||:    |.|.....|:
plant    28 SLMS-LPYEIIE--NILARISKWSYPNLSLVSKSFL-SLLSSPQLYKTRSEIGTTEPCLYFCLES 88

  Fly   295 KNYLLLPQERPLMQGPRTRPRKPTRRGEVLFAVGGWCSGDAIASVERFDPQTNDWKMV-APMSKR 358
            .|: ..||...|...|          .|.|...|                ..:|:.:: .|.|..
plant    89 ANH-SSPQWYTLWMKP----------DETLTGTG----------------TIHDYSLIPLPSSSP 126

  Fly   359 RCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVG 423
            ........:...:|.:|||..:|  :|:..:|.::|.|. |....|..|:.....::|..:|.:|
plant   127 VLRTSTVAVGSEIYVIGGHFNRS--SSVRIFDCRSNTWR-DGPNMTVARSDPVAVLIDQRIYVLG 188

  Fly   424 GQDGVQCLNHVERYDPKENKWSKV----APMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERY 484
            |::..:..:..|.:|.|...|..:    |.:..||            |.:..:          ||
plant   189 GREMDESDDWFEVFDIKTQTWRALPSFRAGLELRR------------YIVWPN----------RY 231

  Fly   485 DPRHN------KWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVA 543
            .||..      :.:.|:|.:...|....|..|:|                 .|.|..:||..:..
plant   232 FPRLGDSQTAVRLINVNPNALEGKLYVAAQINDY-----------------TYEPKDDTWKVVSK 279

  Fly   544 MTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEVYDPETNQWR-------LC--------GCMNY 593
            .:.||..| ..|:...:||.    ...:|:.   ||.|..:||       ||        |....
plant   280 SSIRRVKV-WCVIENVMYAC----HDVFLRW---YDYEDRRWREIQGLEELCYHPTRGFSGAERI 336

  Fly   594 RRLGGGVGVMRAP-QTEN----YMWC 614
            ...||.:.||..| |::.    .:||
plant   337 VNYGGKLVVMWRPVQSDGKDKIEIWC 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 80/374 (21%)
KELCH repeat 359..403 CDD:276965 10/43 (23%)
KELCH repeat 407..451 CDD:276965 10/47 (21%)
KELCH repeat 454..497 CDD:276965 7/48 (15%)
KELCH repeat 501..545 CDD:276965 8/43 (19%)
KELCH repeat 548..593 CDD:276965 14/59 (24%)
AT5G39560NP_198772.2 NanM <130..>259 CDD:442289 31/153 (20%)
KELCH repeat 131..168 CDD:276965 10/39 (26%)
KELCH repeat 172..220 CDD:276965 10/47 (21%)
Blue background indicates that the domain is not in the aligned region.

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