DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT5G35950

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_198444.1 Gene:AT5G35950 / 833586 AraportID:AT5G35950 Length:444 Species:Arabidopsis thaliana


Alignment Length:276 Identity:55/276 - (19%)
Similarity:88/276 - (31%) Gaps:99/276 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 HDGQSYLNSIERY-----------DPQTNQWSCDV-----APTTSCRTSVG-VAVLDGF----LY 420
            |..:.||.|||.|           ..:|||.:.|:     ....|.|:..| :....||    ||
plant    71 HLQKEYLLSIEGYYDISTGVIQSIQFKTNQQTSDMMGFNEGTKFSLRSMRGRIIGFHGFADKNLY 135

  Fly   421 AV---------------GGQDGVQCLNHVERYDPKEN---------------KWSKVAPMTTRRL 455
            ::               |||:..:..:|...||....               .:.||..:.....
plant   136 SLRAYYIRIPATKSAMDGGQNTGRGYDHGGDYDGVRKVYVTFDGTSIRNMRVDYDKVGQVECYEY 200

  Fly   456 GVAVAVLGGF--------LYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVF--- 509
            ||.:.....|        :.::|||..          |.:..:.:.:..::.:..:...:||   
plant   201 GVKIGTQNQFTINYPYECITSVGGSYA----------DTQPYRCIVLRSLTFKTSNGRTSVFGKE 255

  Fly   510 ----------NNYIYAVGGR-DDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAV 563
                      .|.|....|| ..|:: |..|.|.|    :||....|.:..|.|         ..
plant   256 TGTTFLLESQGNAIVGFHGRVGSCVD-SIGEYYAP----FSPYPPPTEKLEGQG---------GD 306

  Fly   564 GG--FDGSAYLKTIEV 577
            ||  :|..|:|...:|
plant   307 GGDSWDDGAFLNVKKV 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 55/276 (20%)
KELCH repeat 359..403 CDD:276965 11/41 (27%)
KELCH repeat 407..451 CDD:276965 14/78 (18%)
KELCH repeat 454..497 CDD:276965 7/50 (14%)
KELCH repeat 501..545 CDD:276965 13/57 (23%)
KELCH repeat 548..593 CDD:276965 8/32 (25%)
AT5G35950NP_198444.1 Jacalin 13..141 CDD:396138 18/69 (26%)
Jacalin 158..289 CDD:396138 22/141 (16%)
Jacalin 318..441 CDD:396138 1/5 (20%)
Blue background indicates that the domain is not in the aligned region.

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