DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT5G03000

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_195920.1 Gene:AT5G03000 / 831712 AraportID:AT5G03000 Length:354 Species:Arabidopsis thaliana


Alignment Length:285 Identity:69/285 - (24%)
Similarity:115/285 - (40%) Gaps:65/285 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 DELNVRSEE--QVFNAVMSWLKYNVAERRQHLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSD-EA 286
            :|.|..|:.  .||:::...|..|.      ||:|.:..| |.||   ||......|:...| ||
plant    27 NETNKSSDSPPTVFSSLPDELILNC------LARVSRFYR-PSLS---LVNKEFQSLIASPDLEA 81

  Fly   287 CRDLVDEAKNYLLL--------PQER-----PLMQGPRTRP-------RKPTRR-----GEVLFA 326
            .|..:...:|:|.:        |..|     |:.:..:.:|       :.||..     |..::.
plant    82 TRSRIGVTENHLYVCLESNKNNPNPRWFTLAPIPKEQKVKPIIPSFPYQHPTSSTFVSIGSEIYI 146

  Fly   327 VGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDP 391
            :||:........|...|.:::..:.:..|:..|......|::..:|.|||...::..|..|.:||
plant   147 IGGFVKRKRSRRVLVLDCRSHQCRRLPNMALPRVSAAADVIDGKIYVVGGSKSKNIDNWGEVFDP 211

  Fly   392 QTNQWSCDVAPTT---SCRTSV--GVAVLDGFLYAVGGQ-------------DGVQCLNHVER-- 436
            :|..|. .:.|||   :.:.||  |..|:.|.:|.:.|.             |.:.|...|.:  
plant   212 ETQTWE-PIFPTTVDLTTQKSVFPGKLVMGGKVYDMDGLKVNLNLNSCVVEIDNMMCQISVCKGI 275

  Fly   437 ---YDPKEN-KWSKVAPMTTRRLGV 457
               ||.:|: .|:|  .|...|||:
plant   276 LVWYDSEEDLVWNK--SMVFDRLGL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 69/285 (24%)
KELCH repeat 359..403 CDD:276965 12/43 (28%)
KELCH repeat 407..451 CDD:276965 15/64 (23%)
KELCH repeat 454..497 CDD:276965 3/4 (75%)
KELCH repeat 501..545 CDD:276965
KELCH repeat 548..593 CDD:276965
AT5G03000NP_195920.1 F-box 40..85 CDD:279040 17/54 (31%)
KELCH repeat 138..175 CDD:276965 5/36 (14%)
Kelch 144..189 CDD:128874 7/44 (16%)
Kelch_1 178..219 CDD:279660 12/41 (29%)
KELCH repeat 179..227 CDD:276965 15/48 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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