DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT4G39760

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_195686.1 Gene:AT4G39760 / 830134 AraportID:AT4G39760 Length:369 Species:Arabidopsis thaliana


Alignment Length:168 Identity:41/168 - (24%)
Similarity:60/168 - (35%) Gaps:41/168 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 VAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSP-MSTRRKHLGCAVFNNY--IYAVGG 518
            |...::|...|.:||.|.... ::|..|.......::.|| ||..|  :...|...|  ||.:||
plant   123 VPSVIVGSETYIVGGYDDALS-SSVWFYKNGKIHTLSKSPSMSVAR--IDAVVVGQYPNIYVMGG 184

  Fly   519 RDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGFD-GSAYL---KTIEVYD 579
            .|....::..|.:|..|.||.|:......        |.|||....... .:.|:   |...:||
plant   185 CDSDESMNWGEVFNIKTQTWEPLPDPGPE--------VRGQLVRKMKMQKKNVYVSSEKKDYIYD 241

  Fly   580 PETNQWRLCGCMNYRRLGGGVGVMRAPQTE---NYMWC 614
            .|...|::                    ||   |:.||
plant   242 TEERTWKV--------------------TEAVFNFSWC 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 36/136 (26%)
KELCH repeat 359..403 CDD:276965
KELCH repeat 407..451 CDD:276965
KELCH repeat 454..497 CDD:276965 10/40 (25%)
KELCH repeat 501..545 CDD:276965 14/45 (31%)
KELCH repeat 548..593 CDD:276965 10/48 (21%)
AT4G39760NP_195686.1 F-box 16..62 CDD:279040
KELCH repeat 167..212 CDD:276965 14/46 (30%)
Kelch_1 170..211 CDD:279660 13/40 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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