DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT4G39753

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_568070.1 Gene:AT4G39753 / 830132 AraportID:AT4G39753 Length:390 Species:Arabidopsis thaliana


Alignment Length:212 Identity:49/212 - (23%)
Similarity:78/212 - (36%) Gaps:53/212 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 YDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTV----------ERYDPR---- 487
            :|.||.:..|....|..::..:.|             .|.||..|          :.|.|.    
plant   112 FDDKEEEKKKKKKSTLVQVPSSYA-------------SQTPLLVVGIDSDVYAFKQCYPPSRVMF 163

  Fly   488 -HNK----WVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSA---ERYNPLTNTWSPI-VA 543
             .||    |.....|:..|.:....||:..||.:||   |.|..||   |.::|.|.||.|: |.
plant   164 VRNKECVIWRNAPDMTVARANPVAYVFDRKIYVMGG---CAETESANWGEVFDPKTQTWEPLPVP 225

  Fly   544 MTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIE----VYDPETNQWRLCG--CMNYRRLGGGVGV 602
            ....|       .:..:..:....|..|:::.:    ||||...:|.:..  .:|..|...| .|
plant   226 SPELR-------FSSMIRKIEMIQGKFYVRSNDSKDSVYDPIREKWNVAAKPQLNDSRCSVG-NV 282

  Fly   603 MRAPQTENYMWCENSFK 619
            ..:.:..:::|.:|..|
plant   283 WYSCRPNSFLWFDNEIK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 42/176 (24%)
KELCH repeat 359..403 CDD:276965
KELCH repeat 407..451 CDD:276965 4/13 (31%)
KELCH repeat 454..497 CDD:276965 10/61 (16%)
KELCH repeat 501..545 CDD:276965 18/47 (38%)
KELCH repeat 548..593 CDD:276965 8/50 (16%)
AT4G39753NP_568070.1 F-box 40..80 CDD:366220
PHA03098 <171..284 CDD:222983 32/123 (26%)
Kelch_1 181..223 CDD:366584 17/44 (39%)
KELCH repeat 182..227 CDD:276965 18/47 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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