DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT4G39550

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_195665.1 Gene:AT4G39550 / 830109 AraportID:AT4G39550 Length:392 Species:Arabidopsis thaliana


Alignment Length:163 Identity:39/163 - (23%)
Similarity:64/163 - (39%) Gaps:25/163 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   440 KENKWSKVAPMTTRRLGVAVAVL-------------GGFLYAIGGSDGQCPLNTVERYDPRHNKW 491
            |:.|..|...|::..:..|:.||             |..:|.|||...:...:.|...|.:.:.|
plant   110 KKKKKKKKKKMSSGYVLAAIPVLHSRPAYWSGLVAVGSNIYNIGGPIDKAHSSIVSVLDCQSHTW 174

  Fly   492 VAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSS-AERYNPLTNTWSPIVAMTSRRSGVGL-- 553
            .....|...|::....|....||..||..||...|: .|.::|.|.||..:.:..:...|..:  
plant   175 HEGPGMRVERRYPAANVVEGKIYVTGGCKDCSNSSNWMEVFDPRTQTWESVSSPGAEIGGCSIHK 239

  Fly   554 -AVVNGQLYAVGGFDGSAYLKTIEVYDPETNQW 585
             |||.|:: .:....|.       :|.|:..:|
plant   240 SAVVEGEI-LIANSHGL-------IYKPKEGRW 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 39/163 (24%)
KELCH repeat 359..403 CDD:276965
KELCH repeat 407..451 CDD:276965 3/10 (30%)
KELCH repeat 454..497 CDD:276965 11/55 (20%)
KELCH repeat 501..545 CDD:276965 14/44 (32%)
KELCH repeat 548..593 CDD:276965 9/41 (22%)
AT4G39550NP_195665.1 F-box 26..69 CDD:279040
KELCH repeat 138..180 CDD:276965 8/41 (20%)
Kelch_1 184..229 CDD:279660 14/44 (32%)
KELCH repeat 184..229 CDD:276965 14/44 (32%)
KELCH repeat 232..267 CDD:276965 9/41 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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