DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT4G33900

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_567939.1 Gene:AT4G33900 / 829533 AraportID:AT4G33900 Length:379 Species:Arabidopsis thaliana


Alignment Length:432 Identity:88/432 - (20%)
Similarity:146/432 - (33%) Gaps:146/432 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 EEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLKYNVAERRQHLAQV--LQHVRLPLLSPKF 270
            :.||:||          |:|       |||.               ||:|  |.:..|.|:|.||
plant    10 KRFLMLP----------DDL-------VFNC---------------LARVSRLHYPTLSLVSKKF 42

  Fly   271 LVGTVGSDL-----LVRSDEAC-----RDLVDEAKNYLLLPQERPLMQGPRTRPR------KPTR 319
            .......:|     |:...|:|     |...|..:.:..:     :.|||.:..:      .|..
plant    43 RFLLASKELYQTRILLGGTESCLYVCVRLHTDSEQLHWFI-----IYQGPNSSKKVLVPISSPNF 102

  Fly   320 R----------GEVLFAVGGWCSG-------------DAIASVERFDPQTNDWKMVAPMSKRRCG 361
            .          |..::|:||....             :|::||...|.:::.|:....|...|..
plant   103 TSAALPGFVVVGHEIYAIGGGSENKNASINATGSKTYNALSSVMVMDSRSHTWREAPSMRVARVF 167

  Fly   362 VGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTS-CRTSVGVAVLDGFLYAVGGQ 425
            .....|:..:|..||.:..:.:|.:|.:|.:|..|.....|:.. |:.|..:::.......||.:
plant   168 PSACTLDGRIYVTGGCENLNSMNWMEIFDTKTQTWEFLQIPSEEVCKGSEYLSISYQRTVYVGSR 232

  Fly   426 D-------------GVQ-CLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQC 476
            :             |.. ||||....||.                 :..|:....|       :|
plant   233 EKDVTYKMHKGKWRGADICLNHGWSLDPS-----------------SCCVIENVFY-------RC 273

  Fly   477 PLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELS-SAERY---NPLTNT 537
            .|..|..||.:..:|.|:..:.      |...|.||.......|.|.:|: |.|.|   :..|..
plant   274 SLGDVRWYDLKKREWAALKGLE------GLPTFTNYYRNFKSADHCGKLAISWEEYVLVDDETKI 332

  Fly   538 WSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEVYD 579
            |...:|:..|:        ||:::.           |:|.:|
plant   333 WCAEIAIQKRQ--------NGEIWG-----------TLEWFD 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 88/432 (20%)
KELCH repeat 359..403 CDD:276965 10/43 (23%)
KELCH repeat 407..451 CDD:276965 10/57 (18%)
KELCH repeat 454..497 CDD:276965 9/42 (21%)
KELCH repeat 501..545 CDD:276965 13/47 (28%)
KELCH repeat 548..593 CDD:276965 5/32 (16%)
AT4G33900NP_567939.1 F-box_AtAFR-like 15..55 CDD:438923 17/71 (24%)
PHA03098 <88..288 CDD:222983 40/223 (18%)
KELCH repeat 109..162 CDD:276965 9/52 (17%)
NanM <111..>203 CDD:442289 19/91 (21%)
KELCH repeat 165..205 CDD:276965 10/39 (26%)
Blue background indicates that the domain is not in the aligned region.

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