DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT4G23580

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_194089.1 Gene:AT4G23580 / 828458 AraportID:AT4G23580 Length:383 Species:Arabidopsis thaliana


Alignment Length:183 Identity:43/183 - (23%)
Similarity:67/183 - (36%) Gaps:34/183 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   459 VAVLGGFLYAIG-------------GSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFN 510
            |.|:|..:||||             ||.....|::|...:.|.:.|.....|...|........:
plant   114 VVVVGPDVYAIGGGSKNKNVSIYATGSKTYNALSSVMIMNSRSHTWHEAPSMRVGRVFPSACTLD 178

  Fly   511 NYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTI 575
            ..||..||.|:...::..|.::..|.||. .:.:.|..      :..|..|....:.|:.|:|:.
plant   179 GRIYVTGGCDNLDTMNWMEIFDTKTQTWE-FLQIPSEE------ICKGSEYLSVSYQGTVYVKSD 236

  Fly   576 E---VYDPETNQWRLCG-CMNYRRLGGGVGVMRAPQ---TEN--YMWCENSFK 619
            |   .|.....:||... |||     .|..:..:..   .||  |.:||...:
plant   237 EKDVTYKMHKGKWREADICMN-----NGWSLSSSSSYCVVENVFYRYCEGEIR 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 33/143 (23%)
KELCH repeat 359..403 CDD:276965
KELCH repeat 407..451 CDD:276965
KELCH repeat 454..497 CDD:276965 13/50 (26%)
KELCH repeat 501..545 CDD:276965 10/43 (23%)
KELCH repeat 548..593 CDD:276965 11/48 (23%)
AT4G23580NP_194089.1 F-box 15..61 CDD:279040
Kelch 135..179 CDD:128874 8/43 (19%)
Kelch_1 169..209 CDD:279660 10/40 (25%)
KELCH repeat 169..209 CDD:276965 10/40 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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