DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT4G19870

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_193722.2 Gene:AT4G19870 / 827733 AraportID:AT4G19870 Length:400 Species:Arabidopsis thaliana


Alignment Length:206 Identity:49/206 - (23%)
Similarity:78/206 - (37%) Gaps:40/206 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 QCLNHVERYDPKENKWSK-VAPMTTRRLG----VAVAVLGGFLYAIGGSDGQCPLNTVERYDPRH 488
            |..:.||:...|:....| :.|:.:..|.    .|:|| |..:|.|||.......:.|...|.|.
plant   106 QANSMVEKKRKKKKTIGKLLVPIPSSNLSPVSKSAIAV-GSEIYVIGGKVDGALSSAVRILDCRS 169

  Fly   489 NKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSS-AERYNPLTNTWSPIVAMTSRRSGVG 552
            |.|.....|:..||.....:::..||.:||.:...|... ||.::..|.||..:       |..|
plant   170 NTWRDAPSMTVARKRPFICLYDGKIYVIGGYNKLSESEPWAEVFDIKTQTWECL-------SDPG 227

  Fly   553 LAVVNGQLYAVGGFDGS---AYLKTIEVYDPETNQWRLCGCMNYRRLGGGVGVMRAPQTE----- 609
            ..:.|..:|.:...:|.   .|.:....|||:..:|..|           .|.:..|:::     
plant   228 TEIRNCTIYRIAEIEGKIHFGYTQKTYAYDPKQGEWECC-----------EGEVAFPRSQCVMES 281

  Fly   610 -------NYMW 613
                   ||.|
plant   282 VLYTFANNYTW 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 43/166 (26%)
KELCH repeat 359..403 CDD:276965
KELCH repeat 407..451 CDD:276965 6/22 (27%)
KELCH repeat 454..497 CDD:276965 14/46 (30%)
KELCH repeat 501..545 CDD:276965 12/44 (27%)
KELCH repeat 548..593 CDD:276965 11/47 (23%)
AT4G19870NP_193722.2 F-box_AtAFR-like 35..73 CDD:438923
NanM 139..>264 CDD:442289 35/132 (27%)
KELCH repeat 139..178 CDD:276965 13/39 (33%)
KELCH repeat 182..227 CDD:276965 13/51 (25%)
Blue background indicates that the domain is not in the aligned region.

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