DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT3G59940

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_191553.1 Gene:AT3G59940 / 825164 AraportID:AT3G59940 Length:418 Species:Arabidopsis thaliana


Alignment Length:298 Identity:75/298 - (25%)
Similarity:104/298 - (34%) Gaps:105/298 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 GEVLFAVGGWCSGDAIASVERFDPQT-------------------NDWKMVAPMSKRRCGVGVA- 365
            |:||. :|||            ||:|                   ..::...|||..|.....| 
plant   152 GKVLL-IGGW------------DPETLQPVRDVFVLDFFAGEGSGRRFRRGRPMSAARSFFACAS 203

  Fly   366 VLNDLLYAVGGHDGQ-SYLNSIERYDPQTNQWSCDVAPTT---------SCRTSVGVAVLDGFLY 420
            |.:..:|..||||.| :.|.|.|.||.:.::||. :.|.|         |..|..|..||.|:..
plant   204 VGSTKVYVAGGHDDQKNALRSAEVYDVEKDEWSM-LPPMTEGRDECHGFSMATDPGFCVLSGYGT 267

  Fly   421 AVGGQ---DGVQCLNHVERYDPKENKWSKVA-----PMTTRRLGVAVAVLGGFLYAIGGSDGQCP 477
            ...||   ||       |.|||..|.||.:.     |..:.| |...|....|.....|....|.
plant   268 ETQGQFRSDG-------EIYDPITNSWSTIENVWPFPDLSPR-GRTAAAAAEFPGDFRGCRLWCF 324

  Fly   478 LNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWS-PI 541
            ::: ||....|  |..                         .||.|      ::..:.:|.. |:
plant   325 IDS-ERQSQPH--WEV-------------------------EDDSM------KWKVIMDTIRLPV 355

  Fly   542 VAMTS----RRSGVGLAVVNGQLYAVGGFD-GSAYLKT 574
            ..|||    ..||..:|::.|     ||.: |:..:||
plant   356 TTMTSVFAGSLSGQAVAMIGG-----GGEESGTMMVKT 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 75/298 (25%)
KELCH repeat 359..403 CDD:276965 16/45 (36%)
KELCH repeat 407..451 CDD:276965 17/51 (33%)
KELCH repeat 454..497 CDD:276965 10/42 (24%)
KELCH repeat 501..545 CDD:276965 5/44 (11%)
KELCH repeat 548..593 CDD:276965 9/28 (32%)
AT3G59940NP_191553.1 FBOX 19..59 CDD:197608
PHA03098 <121..296 CDD:222983 47/164 (29%)
Kelch_1 195..242 CDD:396078 17/47 (36%)
KELCH repeat 196..242 CDD:276965 17/46 (37%)
KELCH repeat 245..292 CDD:276965 17/53 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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