DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT3G24610

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001319634.1 Gene:AT3G24610 / 822057 AraportID:AT3G24610 Length:375 Species:Arabidopsis thaliana


Alignment Length:268 Identity:60/268 - (22%)
Similarity:90/268 - (33%) Gaps:83/268 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 TNDWKMVAPMSKRR-----------------------CGVGVAVLNDLLYAVGGHDGQSYLNSIE 387
            :|:...|.|.||||                       |...|:.|:....::.....:|.:.|.|
plant     2 SNEAPEVEPHSKRRKKEASPSSSSGFLQSLPEAVAMICLARVSRLDHAALSLVSKSCRSMVLSPE 66

  Fly   388 RYDPQTNQ---------WSCDVAPT--TSC-------RTSVGVAVLDGFLYAVGGQDGVQCLNHV 434
            .|  ||..         :.|...||  |.|       ..|:.|..||             |.:| 
plant    67 LY--QTRSLIGYAEKFLYVCFCMPTDETLCCHEKINGNRSLNVLFLD-------------CRSH- 115

  Fly   435 ERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVS-PMS 498
                    ||..|..|...|:...|:|:.|.:...||...:...:..|.:||:...|..:| |..
plant   116 --------KWHHVTSMRVARVSPEVSVVDGKINVWGGCKYKHYYDWGEVFDPKTQTWADMSIPKP 172

  Fly   499 TRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAV 563
            .|.:.         ||.|    |..::.| ..|.|..:.|.. ....|:|| ....:::..:|:.
plant   173 VREEK---------IYVV----DSWDVGS-YYYLPSKSIWEK-GNQDSKRS-KDWCLIDKLIYSC 221

  Fly   564 GGFDGSAY 571
            |. ||..|
plant   222 GN-DGGIY 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 60/268 (22%)
KELCH repeat 359..403 CDD:276965 11/75 (15%)
KELCH repeat 407..451 CDD:276965 9/43 (21%)
KELCH repeat 454..497 CDD:276965 11/43 (26%)
KELCH repeat 501..545 CDD:276965 8/43 (19%)
KELCH repeat 548..593 CDD:276965 7/24 (29%)
AT3G24610NP_001319634.1 F-box_AtAFR-like 30..71 CDD:438923 8/42 (19%)
NanM <106..>181 CDD:442289 24/105 (23%)
Blue background indicates that the domain is not in the aligned region.

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