DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT3G08810

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_187493.1 Gene:AT3G08810 / 820028 AraportID:AT3G08810 Length:343 Species:Arabidopsis thaliana


Alignment Length:168 Identity:37/168 - (22%)
Similarity:63/168 - (37%) Gaps:32/168 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 VAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCR-TSVGVAVLDGFLYAVGGQDG 427
            |||.:|:....|..:..|..:|:...|.|::.|.  .||:.... :|:..:|.||.....|..|.
plant   129 VAVGSDIYNICGSINKASSSSSVSILDCQSHTWR--EAPSLPVELSSISASVRDGNQGGHGYSDS 191

  Fly   428 VQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVER--------- 483
            .:....|..|:.||.:|..:       :|:..   |.|:.    .|..|.::.|..         
plant   192 RKNSFKVFAYNSKEGRWDHL-------VGLGA---GSFML----PDSYCVIDNVSYSVSDGMFRW 242

  Fly   484 YDPRHNKWVAVSPMSTRRKHL--GCAVFNNYIYAVGGR 519
            ||....:|..:..:....|..  .|.:..:|    ||:
plant   243 YDTEVRRWKDLRGLFQLPKFSAGACVILADY----GGK 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 37/168 (22%)
KELCH repeat 359..403 CDD:276965 11/38 (29%)
KELCH repeat 407..451 CDD:276965 11/44 (25%)
KELCH repeat 454..497 CDD:276965 9/51 (18%)
KELCH repeat 501..545 CDD:276965 5/21 (24%)
KELCH repeat 548..593 CDD:276965
AT3G08810NP_187493.1 F-box_AtAFR-like 24..66 CDD:438923
Kelch_6 126..169 CDD:404790 12/41 (29%)
Blue background indicates that the domain is not in the aligned region.

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