DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT2G44700

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_181998.1 Gene:AT2G44700 / 819078 AraportID:AT2G44700 Length:368 Species:Arabidopsis thaliana


Alignment Length:370 Identity:64/370 - (17%)
Similarity:120/370 - (32%) Gaps:122/370 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 LVRSDE--ACRDLVDEAKNYLLL----PQERPL---------MQGPRTR----------PRKPTR 319
            ||||.|  ..|.|:  .|:||.:    ...||:         ::...|.          |.:|.|
plant    61 LVRSPEIHKARSLL--GKDYLYIGFIDENYRPVYDYWYTLRRIENSTTENLFESIEFPYPSEPNR 123

  Fly   320 -----RGEVLFAVGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDG 379
                 .|..:|.:...|:..:..|:  ||.:..:.:....:..:|....|.::...:|.:||:..
plant   124 FSMNAVGPKIFFISESCTPSSRLSI--FDTRFGELRQGPCLLVKRGYNCVGLVGGKVYVIGGYQD 186

  Fly   380 QSYLNSIERYDPQTNQWSCDVAPTTS------CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYD 438
            ...  :.|.:|..|..|.....|...      |:.:|.   .|..:.|:..::|:.|      ||
plant   187 DEI--AAESFDLNTQTWEAAPIPDEKESHRWICKANVS---FDRKVCALRSREGMTC------YD 240

  Fly   439 PKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKH 503
            .:                                ||.|     :|.:..:::|          ..
plant   241 TR--------------------------------DGSC-----QRSEMPNDQW----------SR 258

  Fly   504 LGCAVFNNYIYAVGGR---------------------DDCMELSSAERYNPLTNTWSPIVAMTSR 547
            :|..|.:|.::....|                     |:...:...|.|..|...|.......|.
plant   259 VGLCVIDNVLFVYFSRFGLMWYDSKLMLWRVVYGFDLDNARSVGIGEYYGKLAFIWEKPSLNVSE 323

  Fly   548 RSGVGLAVVNGQLYAVGGFDGSAYLKTIEVYDPETNQWRLCGCMN 592
            ...:...:: |.|.:..|..|:|  :..::.:...|.:|:|.|::
plant   324 SKEIWCRMI-GLLRSEVGIHGAA--EPSQLVEIVPNGYRMCHCLS 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 61/363 (17%)
KELCH repeat 359..403 CDD:276965 9/43 (21%)
KELCH repeat 407..451 CDD:276965 7/43 (16%)
KELCH repeat 454..497 CDD:276965 5/42 (12%)
KELCH repeat 501..545 CDD:276965 9/64 (14%)
KELCH repeat 548..593 CDD:276965 9/45 (20%)
AT2G44700NP_181998.1 F-box 28..73 CDD:279040 6/11 (55%)
KELCH repeat 123..162 CDD:276965 7/40 (18%)
KELCH repeat 166..207 CDD:276965 9/42 (21%)
Kelch_1 166..205 CDD:279660 9/40 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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