DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT2G29860

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_180547.1 Gene:AT2G29860 / 817536 AraportID:AT2G29860 Length:240 Species:Arabidopsis thaliana


Alignment Length:262 Identity:60/262 - (22%)
Similarity:89/262 - (33%) Gaps:82/262 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 GGHDGQSYLNSIERYDPQTNQWSCD-------VAPTTSCR----------------------TSV 410
            ||.:|.         ||..|.....       |||...|.                      |..
plant     9 GGSNGD---------DPNMNPQELPEELIESIVAPIPRCYYPSLSLLSRAFRHVITSQQLFVTRS 64

  Fly   411 GVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKW-----SKVAPMTTRRL--------GVAVAVL 462
            |:...:..|||..|     |..:.      ..:|     |.: |:..|||        |.||..:
plant    65 GLGFKEPVLYAFIG-----CTPYT------TPRWFILRRSNI-PLQLRRLNSLPHMFPGAAVVTI 117

  Fly   463 GGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSS 527
            |..:|.:||.:.| |::||...|.|.:.|..:..|...|.|....|.:..||.:|||.. .:...
plant   118 GYKIYVMGGYNYQ-PVSTVIIIDCRFHTWHYLQDMQRARYHATPGVIDGRIYVIGGRKK-QDADW 180

  Fly   528 AERYNPLTNTWSPIVAMTSRRSG-----VGLAVVNGQLYAVGGFDGSAYLKTIE--VYDPETNQW 585
            .|.::..|.:|..:.......:.     |..||:.|::..|       :|.|.:  ||.   :.|
plant   181 VEVFDVTTESWETVPTQCPNEASENGLFVTYAVMQGRILGV-------FLLTNQDKVYG---SHW 235

  Fly   586 RL 587
            .|
plant   236 EL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 59/260 (23%)
KELCH repeat 359..403 CDD:276965 8/34 (24%)
KELCH repeat 407..451 CDD:276965 10/70 (14%)
KELCH repeat 454..497 CDD:276965 16/50 (32%)
KELCH repeat 501..545 CDD:276965 11/43 (26%)
KELCH repeat 548..593 CDD:276965 11/47 (23%)
AT2G29860NP_180547.1 F-box_AtAFR-like 23..63 CDD:438923 4/39 (10%)
NanM 109..>195 CDD:442289 26/87 (30%)
KELCH repeat 111..151 CDD:276965 14/40 (35%)
KELCH repeat 155..195 CDD:276965 11/40 (28%)
Blue background indicates that the domain is not in the aligned region.

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