DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT2G29800

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_180541.1 Gene:AT2G29800 / 817530 AraportID:AT2G29800 Length:414 Species:Arabidopsis thaliana


Alignment Length:266 Identity:65/266 - (24%)
Similarity:105/266 - (39%) Gaps:57/266 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 GEVLFAVGGW--CSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYL 383
            |..::.|||:  .....|::|...|.:.|..:.:..|.:.||.....|::..:|.|.|.. :.:.
plant   161 GHKIYVVGGYNFRYNKTISTVLEIDCRFNTCRHLRNMKRDRCSAVAGVIDGRIYVVAGRQ-RRFD 224

  Fly   384 NSIERYDPQTNQWSCDVAPTTSCRTSVGV----AVLDGFLYAVGGQDGVQCLNHVERYDPKENKW 444
            :.:|.:|.:|.:|.....|.:|..:|.|.    .|||..:|.:   ||..|.    .|||:..:|
plant   225 DWVEVFDVETERWELVPGPFSSFASSSGKFIVHVVLDNKIYIM---DGDYCF----AYDPRRRRW 282

  Fly   445 SKVAPMTTRR--LGVAVAVLGGFLYAI------GGSDGQCPLNTVERYDPRHNKWVAVSPMSTRR 501
            ....|.:.:|  ..::..|:...||||      |.|        :..||||...|         |
plant   283 ETWGPESAQRSYWHLSSCVVDDLLYAIVPREIFGAS--------IVVYDPRGIAW---------R 330

  Fly   502 KHLGCAVFNNYIY------AVGGR---DDCMELSSAERYNPLTNTWSPIVAMTSRRSG------V 551
            ..:|...:.|.:|      ..||:   ..|.. ||.:.|.  .:.|...||:.....|      .
plant   331 PVMGLEFWPNLVYFESKMANFGGKLVILGCYR-SSFDYYR--KDVWCVEVALEKHEDGQIWGKVE 392

  Fly   552 GLAVVN 557
            .|::||
plant   393 SLSLVN 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 65/266 (24%)
KELCH repeat 359..403 CDD:276965 10/43 (23%)
KELCH repeat 407..451 CDD:276965 14/47 (30%)
KELCH repeat 454..497 CDD:276965 13/50 (26%)
KELCH repeat 501..545 CDD:276965 13/52 (25%)
KELCH repeat 548..593 CDD:276965 4/16 (25%)
AT2G29800NP_180541.1 F-box_SF 63..103 CDD:459239
KELCH repeat 154..197 CDD:276965 8/35 (23%)
NanM <157..332 CDD:442289 49/195 (25%)
KELCH repeat 201..241 CDD:276965 10/40 (25%)
KELCH repeat 244..287 CDD:276965 14/49 (29%)
KELCH repeat 292..332 CDD:276965 14/56 (25%)
Blue background indicates that the domain is not in the aligned region.

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