DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT2G29780

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_180539.1 Gene:AT2G29780 / 817528 AraportID:AT2G29780 Length:398 Species:Arabidopsis thaliana


Alignment Length:297 Identity:63/297 - (21%)
Similarity:107/297 - (36%) Gaps:68/297 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 GEVLFAVGGWCS-GDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLN 384
            |..::.:||... .:.:.:|...|.:.:....:..|.:.|......|:|..:|.:||.: :.|.:
plant   146 GYKMYVIGGLIGPNNPVKTVFVIDCRVHTCNYLPTMHRARYRAVAEVINGKIYVIGGCE-KRYDD 209

  Fly   385 SIERYDPQTNQWSCDVAPTTSCRTS-------VGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN 442
            .||.:|..|..||  ..|..|...|       |...|:...:|.:....|:.       |||.:.
plant   210 WIEVFDVVTGIWS--TVPDRSHFMSSLPGGGFVTSVVMQNKIYILDATCGLV-------YDPIDG 265

  Fly   443 KWSKVAPMTTRRLGVAV--------AVLGGFLYAIGGSDGQC----PLNTVERYDPRHNKWVAVS 495
            .|.      :..||..:        .|:...||:.   |..|    |:|.   |||....|..:.
plant   266 TWE------SGELGTTLKSYWYKPCCVIEDLLYSF---DPYCLQGSPINV---YDPNVMVWTPMM 318

  Fly   496 PMSTRR----KHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVV 556
            ....|.    .:..|.:.|     .||:   :.:..|...||:|:||.           :.:|::
plant   319 GTGIRAFPDLDYFECKMAN-----FGGK---LMVFGATYNNPVTDTWC-----------IEMALI 364

  Fly   557 NGQLYAVGGFDGSAYLKTIEVYDPETNQWRLCGCMNY 593
            .|:...:.|...|.......||.|..:   ||..:.:
plant   365 KGETGPILGMIDSMVPVLRSVYSPYID---LCRSVTF 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 61/289 (21%)
KELCH repeat 359..403 CDD:276965 13/43 (30%)
KELCH repeat 407..451 CDD:276965 9/50 (18%)
KELCH repeat 454..497 CDD:276965 13/54 (24%)
KELCH repeat 501..545 CDD:276965 10/47 (21%)
KELCH repeat 548..593 CDD:276965 9/44 (20%)
AT2G29780NP_180539.1 PHA03098 <123..316 CDD:222983 43/191 (23%)
Kelch_1 139..181 CDD:396078 5/34 (15%)
KELCH repeat 139..181 CDD:276965 5/34 (15%)
Kelch_1 184..226 CDD:396078 13/44 (30%)
KELCH repeat 185..226 CDD:276965 13/43 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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