DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT2G29780

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_180539.1 Gene:AT2G29780 / 817528 AraportID:AT2G29780 Length:398 Species:Arabidopsis thaliana


Alignment Length:297 Identity:63/297 - (21%)
Similarity:107/297 - (36%) Gaps:68/297 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 GEVLFAVGGWCS-GDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLN 384
            |..::.:||... .:.:.:|...|.:.:....:..|.:.|......|:|..:|.:||.: :.|.:
plant   146 GYKMYVIGGLIGPNNPVKTVFVIDCRVHTCNYLPTMHRARYRAVAEVINGKIYVIGGCE-KRYDD 209

  Fly   385 SIERYDPQTNQWSCDVAPTTSCRTS-------VGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN 442
            .||.:|..|..||  ..|..|...|       |...|:...:|.:....|:.       |||.:.
plant   210 WIEVFDVVTGIWS--TVPDRSHFMSSLPGGGFVTSVVMQNKIYILDATCGLV-------YDPIDG 265

  Fly   443 KWSKVAPMTTRRLGVAV--------AVLGGFLYAIGGSDGQC----PLNTVERYDPRHNKWVAVS 495
            .|.      :..||..:        .|:...||:.   |..|    |:|.   |||....|..:.
plant   266 TWE------SGELGTTLKSYWYKPCCVIEDLLYSF---DPYCLQGSPINV---YDPNVMVWTPMM 318

  Fly   496 PMSTRR----KHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVV 556
            ....|.    .:..|.:.|     .||:   :.:..|...||:|:||.           :.:|::
plant   319 GTGIRAFPDLDYFECKMAN-----FGGK---LMVFGATYNNPVTDTWC-----------IEMALI 364

  Fly   557 NGQLYAVGGFDGSAYLKTIEVYDPETNQWRLCGCMNY 593
            .|:...:.|...|.......||.|..:   ||..:.:
plant   365 KGETGPILGMIDSMVPVLRSVYSPYID---LCRSVTF 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 61/289 (21%)
KELCH repeat 359..403 CDD:276965 13/43 (30%)
KELCH repeat 407..451 CDD:276965 9/50 (18%)
KELCH repeat 454..497 CDD:276965 13/54 (24%)
KELCH repeat 501..545 CDD:276965 10/47 (21%)
KELCH repeat 548..593 CDD:276965 9/44 (20%)
AT2G29780NP_180539.1 F-box_SF 48..88 CDD:459239
NanM 132..274 CDD:442289 31/143 (22%)
KELCH repeat 139..181 CDD:276965 5/34 (15%)
KELCH repeat 185..226 CDD:276965 13/43 (30%)
Blue background indicates that the domain is not in the aligned region.

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