DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT2G29600

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_180520.1 Gene:AT2G29600 / 817509 AraportID:AT2G29600 Length:415 Species:Arabidopsis thaliana


Alignment Length:386 Identity:83/386 - (21%)
Similarity:138/386 - (35%) Gaps:101/386 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 NFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLKYNVAERRQHLAQVLQHVRLP 264
            :|::|:.|           ||:..:..| :.|.|.|...::::...|..|.|..:.|...:..|.
plant    87 SFRQVISS-----------VDLFQTRSL-IGSTEPVLYTLITFTSPNFEEPRWFILQRRNNTSLQ 139

  Fly   265 L-----LSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERPLMQGPRTRPRKPTRRGEVL 324
            |     |.|.|              ..|..:....|.|        :|.|.|:.    .||.:.:
plant   140 LSLVTSLPPMF--------------PGCTTVTIGHKIY--------VMGGLRSL----NRRAKTV 178

  Fly   325 FAVGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERY 389
            |.:               |.:.:.|:.:..|...|.....||::.::|.|||...:|. :.:|.:
plant   179 FVI---------------DCRFHTWRYLQEMQVARSYAASAVIDGMIYVVGGSTKRSD-DWVEVF 227

  Fly   390 DPQTNQWS---CDVAPTTSCRTSVGV-AVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVAPM 450
            :.:||.|.   ..::|....:....| .|||..:|.:.|.:.|       .||.:..:|....| 
plant   228 NVETNTWENVPSVLSPYGRSKAPFNVHFVLDNKIYILDGNNRV-------AYDLRGRRWEDWGP- 284

  Fly   451 TTRRLG----VAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNN 511
            ...:||    |...|:...|||:  ......:..:..||||...|         |..:|.....|
plant   285 AGNQLGYFWQVLYCVVDNLLYAV--VPDHLHVTPIVVYDPREMGW---------RPVMGVDYLPN 338

  Fly   512 YIYA------VGGR---DDCMELSSAERYNPLTNTWSPIVAMTSRRSG------VGLAVVN 557
            .:|:      .||:   ..|.:..:...|....|.|...||:..|..|      ..|::||
plant   339 LVYSESRMTNFGGKLMILGCYQSQARFDYYGEVNVWCVEVALERREDGEIWGKVQSLSLVN 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 83/386 (22%)
KELCH repeat 359..403 CDD:276965 12/46 (26%)
KELCH repeat 407..451 CDD:276965 11/44 (25%)
KELCH repeat 454..497 CDD:276965 12/46 (26%)
KELCH repeat 501..545 CDD:276965 12/52 (23%)
KELCH repeat 548..593 CDD:276965 4/16 (25%)
AT2G29600NP_180520.1 F-box 60..103 CDD:279040 5/26 (19%)
Kelch_1 149..195 CDD:279660 12/86 (14%)
KELCH repeat 152..194 CDD:276965 11/68 (16%)
Kelch_1 197..239 CDD:279660 12/42 (29%)
KELCH repeat 198..241 CDD:276965 12/43 (28%)
NHL <207..>295 CDD:302697 23/96 (24%)
NHL repeat 247..282 CDD:271320 10/41 (24%)
KELCH repeat 289..330 CDD:276965 13/51 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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