DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT2G20380

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_179628.1 Gene:AT2G20380 / 816557 AraportID:AT2G20380 Length:348 Species:Arabidopsis thaliana


Alignment Length:319 Identity:69/319 - (21%)
Similarity:106/319 - (33%) Gaps:98/319 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 PQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRT 408
            |:....|.::|.|.       ::.|||:..:.....|||...:...   :..:...:|.....:|
plant     5 PEKKRRKKLSPESN-------SLPNDLIVTILARLSQSYYPKLSLV---SKTFRAILASPELYQT 59

  Fly   409 SVGVAVLDGFLYAVGGQDGVQCLNHVERYDP-------KENKWSKVAPMTTRRLGVAVAVL---- 462
            .:.::..:.|||.        ||:.....:|       |.|:     .:||::...:|.:|    
plant    60 RILLSRTETFLYV--------CLSFPGEPNPGWFTLYRKPNQ-----TLTTKKKKNSVHLLAPIL 111

  Fly   463 -------------GGFLYAI------GGSDGQCPLNTVERYDPRHNKWVAVSPMST--RRKHLGC 506
                         |.:|||.      |.||.   ||.||.|:.....|:.|.|...  :.:|:  
plant   112 NSPPVEFPSLIAVGSYLYAFRAAIEEGTSDS---LNCVEVYNTDTQTWIPVPPNKRIFKLQHM-- 171

  Fly   507 AVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVN-----GQLYAVGGF 566
               ...:|....:........||...||         ....||.:...||.     .:.|.|.||
plant   172 ---KGMLYMKVSKLLSFVAQDAEELAPL---------FPKLRSLLSTEVVAFKPKVSEGYEVLGF 224

  Fly   567 D-----GSAYLKTIEV----YDPETN-QWRLCGCMNYRRLGGG----VGVMRAPQTENY 611
            .     |......||.    |||... :||       ||.||.    ||:...|:...|
plant   225 SVNTDLGRGSFCMIEEITYHYDPSVKFRWR-------RRQGGVWRSLVGLEGLPKFARY 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 60/289 (21%)
KELCH repeat 359..403 CDD:276965 7/43 (16%)
KELCH repeat 407..451 CDD:276965 9/50 (18%)
KELCH repeat 454..497 CDD:276965 16/65 (25%)
KELCH repeat 501..545 CDD:276965 6/43 (14%)
KELCH repeat 548..593 CDD:276965 16/59 (27%)
AT2G20380NP_179628.1 F-box 19..62 CDD:279040 8/45 (18%)
Kelch_6 118..161 CDD:290672 14/45 (31%)
KELCH repeat 120..161 CDD:276965 14/43 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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