DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and klhl3

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_009289334.1 Gene:klhl3 / 568556 ZFINID:ZDB-GENE-120203-4 Length:593 Species:Danio rerio


Alignment Length:552 Identity:249/552 - (45%)
Similarity:346/552 - (62%) Gaps:10/552 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RPPSPARLSHTSEKHPKVTLTELNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGE 104
            :.|.....|||   |.:.....:|.||..:.||||:|..|..:|.||||:|::||.||||||||:
Zfish    22 KDPGLHTFSHT---HMRKAFLLMNDLRSRKMLCDVLLVAGEVEIPAHRVVLASCSPYFCAMFTGD 83

  Fly   105 LEESRQTEVTIRDIDENAMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQL 169
            :.||:...|.|||:|...:..|:|:.|:|.|.|.|.|||.|||||.||||::::.:||:||:.||
Zfish    84 MSESKANHVEIRDVDGQTLLKLVDYIYSAEIEVSEENVQVLLPAASLLQLMDVRQVCCDFLQTQL 148

  Fly   170 DPTNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQ 234
            .||||||||||||.|:|..||..|..:.:.:|.:||..|||:.|.:.|:..:|.||:|.|.:||:
Zfish   149 HPTNCLGIRAFADLHACTVLLSQAHAYAEQHFTDVMVGEEFMALSLQQVCSLISSDKLTVSTEEK 213

  Fly   235 VFNAVMSWLKYNVAERRQHLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLL 299
            ||.|:::|:|::...|.:|:.::::||||||||..:||..|..:.|::::..|:|.:.||..|.|
Zfish   214 VFEAMVAWIKHDKEARLEHMPKLMEHVRLPLLSRDYLVQIVEEEPLIKNNNTCKDFLIEAMKYHL 278

  Fly   300 LP-QERPLMQGPRTRPRKPTRRGEVLFAVGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVG 363
            || .:|.|::..|||||.|....:|:..|||. :..||.|||.:|.|.:.|..||.:..|||..|
Zfish   279 LPADQRHLIKTDRTRPRTPISLPKVMMVVGGQ-APKAIRSVECYDFQEDRWYQVADLPSRRCRAG 342

  Fly   364 VAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGV 428
            |..:...:|||||.:|...:.:::.||...:||| .:......|:::|.|||...||||||.||.
Zfish   343 VVYMAGKVYAVGGFNGSLRVRTVDVYDGLKDQWS-SIPSMQERRSTLGAAVLGDLLYAVGGFDGS 406

  Fly   429 QCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDG---QCPLNTVERYDPRHNK 490
            ..|:.||.|:||.|:|..||||.|||..|.|.|:.|.|||:||.||   || |:|||.::|..||
Zfish   407 TGLSSVEAYNPKANEWMFVAPMNTRRSSVGVGVVDGKLYAVGGYDGASRQC-LSTVEEFNPVSNK 470

  Fly   491 WVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAV 555
            |..||.|||||...|..|.:..:||.||.|..:...|.|.|:|.||||..:..|...|...|:..
Zfish   471 WCYVSDMSTRRSGAGVGVLSGQLYAAGGHDGPLVRKSVEVYDPTTNTWRQVCDMNMCRRNAGVCA 535

  Fly   556 VNGQLYAVGGFDGSAYLKTIEVYDPETNQWRL 587
            :||.||.:||.|||..|.::|.|||..::|.|
Zfish   536 INGLLYVIGGDDGSCNLSSVEYYDPAADKWSL 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 64/126 (51%)
PHA03098 69..587 CDD:222983 240/521 (46%)
KELCH repeat 359..403 CDD:276965 15/43 (35%)
KELCH repeat 407..451 CDD:276965 24/43 (56%)
KELCH repeat 454..497 CDD:276965 24/45 (53%)
KELCH repeat 501..545 CDD:276965 16/43 (37%)
KELCH repeat 548..593 CDD:276965 18/40 (45%)
klhl3XP_009289334.1 PHA03098 51..567 CDD:222983 239/518 (46%)
KELCH repeat 338..381 CDD:276965 15/43 (35%)
KELCH repeat 385..428 CDD:276965 23/42 (55%)
KELCH repeat 432..478 CDD:276965 24/46 (52%)
KELCH repeat 481..526 CDD:276965 17/44 (39%)
KELCH repeat 528..569 CDD:276965 18/40 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59391
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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