DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and ivns1abpb

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_958891.1 Gene:ivns1abpb / 334334 ZFINID:ZDB-GENE-030131-6266 Length:640 Species:Danio rerio


Alignment Length:615 Identity:181/615 - (29%)
Similarity:303/615 - (49%) Gaps:89/615 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 TLTELNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELE-ESRQTEVTIRDIDEN 121
            |:.::|.||:..:.|||.|.|.|.::.||:.:|:.||.|...:|..:.| :...:.|...|::.:
Zfish    18 TVAKMNALRKSGQFCDVRLLVCGHELMAHKAVLACCSPYLFEIFNADTEPQGGVSLVKFDDLNPD 82

  Fly   122 AMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGIRAFADTHSC 186
            |||:|:::.|||.:..::|.|..:..||..|:|..::.||.|:|..::|..:.:..|.||.:.:.
Zfish    83 AMEVLLNYAYTAQLKADKSLVSDVYSAAKKLKLERVKQICGEYLLSKMDSQSAISYRNFASSMAD 147

  Fly   187 RELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLK------- 244
            ..||...|.:.|.:..|:.|.::||.||..:| :::..|.||:....::::.|:||::       
Zfish   148 GRLLGKIDGYIQDHLHEISEQDDFLKLPRLKL-EVMLEDNLNLPGNGKLYSKVISWVQRSLWKNG 211

  Fly   245 -------------YNVAERRQHLAQVLQ-----------HVRLPLLSP---KFLVGTVGSDLLVR 282
                         |..|:.:.|...:|:           |::.....|   :..:|:..|..:..
Zfish   212 DPLEKLMEEVQTLYYSADHKLHDGSLLEGQAEVCSTEDDHIQFVQKKPPRERDEMGSGASGSISP 276

  Fly   283 SD-----EACRDLVDE---AKNYLLL-----------------PQERP-----LMQGPR------ 311
            |:     ...:.:..|   :.:||.|                 |...|     :::.|.      
Zfish   277 SNSQFNKHEWKYIASEKTTSNSYLCLAVLRGLLCVISLHGRTSPHNSPSATPCVLKSPNFEAQLE 341

  Fly   312 ------TRPRKPTRRG----EV---LFAVGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVG 363
                  .:|....|.|    |:   |.|.||:...:.:.:||.:||:.:.|..:|||...|....
Zfish   342 DLQEKLLKPMHYARSGLGTAELDCKLIAAGGYNREECLRTVECYDPKKDCWTFIAPMRTPRARFQ 406

  Fly   364 VAVLNDLLYAVGGHDGQS-YLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQD- 426
            :|||...:|.:||.:|.| .|:..|.|:|:.::| ..|....:.|.:.||..|...|:.|||.| 
Zfish   407 MAVLMGEVYVMGGSNGHSDELSCGEMYNPRADEW-IQVPELRTNRCNAGVCSLQNKLFVVGGSDP 470

  Fly   427 -GVQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNK 490
             |.:.|.:.:.:||....|:..||:..:|...||..|.|::|.|||::....||:||||:|.:|.
Zfish   471 CGQKGLKNCDSFDPVTKMWTSCAPLNIKRHQAAVCELSGYMYVIGGAESWNCLNSVERYNPENNT 535

  Fly   491 WVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAV 555
            |..|:.|:..|:..|.||:...::.|||.|....|...|.|:|.||.|..:.:|||.||..||||
Zfish   536 WTLVASMNVARRGAGVAVYEGKLFVVGGFDGSHALRCVEVYDPATNEWRMLGSMTSARSNAGLAV 600

  Fly   556 VNGQLYAVGGFDGSAYLKTIEVYDPETNQW 585
            :|..|.|||||||:.:|.::|||:.|.|:|
Zfish   601 LNNVLCAVGGFDGNEFLNSMEVYNLEKNEW 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 38/118 (32%)
PHA03098 69..587 CDD:222983 177/604 (29%)
KELCH repeat 359..403 CDD:276965 15/44 (34%)
KELCH repeat 407..451 CDD:276965 16/45 (36%)
KELCH repeat 454..497 CDD:276965 19/42 (45%)
KELCH repeat 501..545 CDD:276965 15/43 (35%)
KELCH repeat 548..593 CDD:276965 22/38 (58%)
ivns1abpbNP_958891.1 BTB 22..127 CDD:279045 35/104 (34%)
PHA03098 23..633 CDD:222983 180/610 (30%)
BACK 135..233 CDD:197943 22/98 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..278 3/20 (15%)
KELCH repeat 355..399 CDD:276965 14/43 (33%)
Kelch 366..412 CDD:128874 16/45 (36%)
Kelch 1 366..412 16/45 (36%)
KELCH repeat 402..446 CDD:276965 15/44 (34%)
Kelch 2 413..460 15/47 (32%)
Kelch 414..460 CDD:128874 15/46 (33%)
Kelch_1 450..496 CDD:279660 16/45 (36%)
KELCH repeat 450..495 CDD:276965 15/44 (34%)
Kelch 3 462..509 16/46 (35%)
KELCH repeat 499..542 CDD:276965 19/42 (45%)
Kelch 4 510..556 19/45 (42%)
Kelch 512..556 CDD:128874 19/43 (44%)
KELCH repeat 546..590 CDD:276965 15/43 (35%)
Kelch 557..603 CDD:128874 20/45 (44%)
Kelch 5 557..603 20/45 (44%)
Kelch_1 592..632 CDD:279660 22/39 (56%)
KELCH repeat 593..632 CDD:276965 22/38 (58%)
Kelch 6 605..640 15/26 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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