DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and Klhl18

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_006244067.1 Gene:Klhl18 / 316012 RGDID:1310570 Length:579 Species:Rattus norvegicus


Alignment Length:544 Identity:236/544 - (43%)
Similarity:337/544 - (61%) Gaps:9/544 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQTEVTIRDIDENAMELLIDF 129
            :||..:||||.|.:|..|..|||::|:|...||.||||.::.|.:|.|:.::.:|.:|:|.||:|
  Rat    31 IRRQGKLCDVTLKIGDHKFSAHRIVLAASIPYFHAMFTNDMMECKQDEIVMQGMDPSALEALINF 95

  Fly   130 CYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGIRAFADTHSCRELLRIAD 194
            .|..::.:::.|||:||..|..|||..|:|.||.||:.:|.|.||||:|.||:|..|..|...|:
  Rat    96 AYNGNLAIDQQNVQSLLMGASFLQLQSIKDACCTFLRERLHPKNCLGVRQFAETMMCAVLYDAAN 160

  Fly   195 KFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLKYNVAERRQHLAQVLQ 259
            .|...:|.||..|||||.||:..:::::..|||||:||||||.|.::|::|:..:|...|.::|.
  Rat   161 SFIHQHFVEVSLSEEFLALPLEDVLELLSRDELNVKSEEQVFEAALAWIRYDREQRGPCLPELLS 225

  Fly   260 HVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERPLMQGPRTRPRKPTRRGEVL 324
            ::||||..|:||...|..|.|||....|||||||||:|.|:|:.||.:...|||||..|....::
  Rat   226 NIRLPLCRPQFLSDRVQQDDLVRCCHKCRDLVDEAKDYHLMPERRPHLPAFRTRPRCCTSIAGLI 290

  Fly   325 FAVGG------WCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYL 383
            :||||      :.:||::..||.|||..|.|:...||:..|..|||||:|.||||:||:|||..|
  Rat   291 YAVGGLNSAANFYAGDSLNVVEVFDPIANRWEKCHPMTTARSRVGVAVVNGLLYAIGGYDGQLRL 355

  Fly   384 NSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVA 448
            :::|.|:|:|:.|: .|....|.|:::|..||||.:|..||.||...||.||.|.|:.:||:.|.
  Rat   356 STVEAYNPETDTWT-RVGSMNSKRSAMGTVVLDGQIYVCGGYDGNSSLNSVETYSPETDKWTVVT 419

  Fly   449 PMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYI 513
            ||::.|....|.|..|.:|..||.||....::||:|:.....|...:.|..:|...|.|...:.:
  Rat   420 PMSSNRSAAGVTVFEGRIYVSGGHDGLQIFSSVEQYNHHTATWHPAASMLNKRCRHGAASLGSKM 484

  Fly   514 YAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEVY 578
            :..||.|....||.||.|:.:.:.|..||.|.:|||.|.|....|:||||||:||.:.|.::|:|
  Rat   485 FVCGGYDGSGFLSIAEMYSSVADQWCLIVPMHTRRSRVSLVASCGRLYAVGGYDGQSNLSSVEMY 549

  Fly   579 DPETNQWRLCGCMNYRRLGGGVGV 602
            ||||::|.....|....  |||||
  Rat   550 DPETDRWTFMAPMACHE--GGVGV 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 49/110 (45%)
PHA03098 69..587 CDD:222983 228/523 (44%)
KELCH repeat 359..403 CDD:276965 23/43 (53%)
KELCH repeat 407..451 CDD:276965 21/43 (49%)
KELCH repeat 454..497 CDD:276965 13/42 (31%)
KELCH repeat 501..545 CDD:276965 14/43 (33%)
KELCH repeat 548..593 CDD:276965 22/44 (50%)
Klhl18XP_006244067.1 BTB 28..131 CDD:279045 43/99 (43%)
PHA03098 34..557 CDD:222983 227/523 (43%)
BACK 140..242 CDD:285009 45/101 (45%)
KELCH repeat 282..327 CDD:276965 14/44 (32%)
Kelch 289..341 CDD:128874 21/51 (41%)
Kelch_1 330..375 CDD:279660 23/45 (51%)
KELCH repeat 331..374 CDD:276965 23/43 (53%)
KELCH repeat 378..422 CDD:276965 21/43 (49%)
Kelch 389..435 CDD:128874 19/45 (42%)
KELCH repeat 425..469 CDD:276965 13/43 (30%)
Kelch 436..481 CDD:128874 13/44 (30%)
KELCH repeat 472..516 CDD:276965 14/43 (33%)
Kelch_1 472..515 CDD:279660 14/42 (33%)
Kelch_1 518..562 CDD:279660 22/43 (51%)
KELCH repeat 519..562 CDD:276965 21/42 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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