DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and Klhl28

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001100205.1 Gene:Klhl28 / 299103 RGDID:1311326 Length:571 Species:Rattus norvegicus


Alignment Length:571 Identity:244/571 - (42%)
Similarity:343/571 - (60%) Gaps:28/571 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ARLSHTSEKHPKVTLTELNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESR 109
            |.|:|.   |.:..|..||:||:|.||||::|.||..||.||:|:|::.|.||.|||||.|.|..
  Rat    11 ANLTHL---HSEQLLQGLNLLRQHHELCDIILRVGDVKIHAHKVVLASISPYFKAMFTGNLSEKE 72

  Fly   110 QTEVTIRDIDENAMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNC 174
            .:||..:.|||.|::.::::.||..:.:.:..|::|||||.|||:..:...||.||:.||||.||
  Rat    73 NSEVEFQCIDEAALQAIVEYAYTGTVFISQDTVESLLPAANLLQIKLVLKECCTFLESQLDPGNC 137

  Fly   175 LGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAV 239
            :||..||:|:.|.:|...|.||...||:.|.::|||..|..|.|.:|:.:|.|||.:||.||.|:
  Rat   138 IGISRFAETYGCHDLYLAATKFICQNFESVCQTEEFFELTHGDLDEIVSNDCLNVATEETVFYAL 202

  Fly   240 MSWLKYNVAERRQHLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQER 304
            .||:||:|.||:::|||:|..|||||||.|||.....::.|:|.|..|:.|::||..|..:|:.|
  Rat   203 ESWIKYDVQERQKYLAQLLNSVRLPLLSVKFLTRLYEANHLIRDDRTCKHLLNEALKYHFMPEHR 267

  Fly   305 -----PLMQGPRTRPRKPTRRGEVLFAVGGWCSG--DAIASVERFDPQTNDWKMVAPMSKRRCGV 362
                 .||..||..|:       ||.|||| .||  ..:.|||.:.||.:.|..:||::..|...
  Rat   268 LSHQTVLMTRPRCAPK-------VLCAVGG-KSGLFACLDSVEMYFPQNDSWIGLAPLNIPRYEF 324

  Fly   363 GVAVLNDLLYAVGGHDG--------QSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFL 419
            |:.||:..:|.:||.:.        :.:.||:|.::|.||.|: .:......|:::||.||.|.:
  Rat   325 GICVLDQKVYVIGGIETSVRPGVTVRKHENSVECWNPDTNTWT-SLERMNESRSTLGVVVLAGEV 388

  Fly   420 YAVGGQDGVQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERY 484
            ||:||.||...|..||:|.||..:|..||||||.|...|.|||.|.:|||||. |...:|:||||
  Rat   389 YALGGYDGQSYLQSVEKYIPKIRQWQPVAPMTTTRSCFAAAVLDGMIYAIGGY-GPAHMNSVERY 452

  Fly   485 DPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRS 549
            ||..:.|..|:.|:.:|.|.|..|...:|:.|||.:....|||.|||:|..|.|:....|...|:
  Rat   453 DPSKDSWETVASMADKRIHFGVGVMLGFIFVVGGHNGVSHLSSIERYDPHQNQWTVCRPMKEPRT 517

  Fly   550 GVGLAVVNGQLYAVGGFDGSAYLKTIEVYDPETNQWRLCGCMNYRRLGGGV 600
            |||.||::..||.|||..||:||.|::.|||.::.|.....|.|.|...|:
  Rat   518 GVGAAVIDNYLYVVGGHSGSSYLNTVQKYDPISDTWLDSAGMIYCRCNFGL 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 58/126 (46%)
PHA03098 69..587 CDD:222983 230/532 (43%)
KELCH repeat 359..403 CDD:276965 14/51 (27%)
KELCH repeat 407..451 CDD:276965 22/43 (51%)
KELCH repeat 454..497 CDD:276965 21/42 (50%)
KELCH repeat 501..545 CDD:276965 17/43 (40%)
KELCH repeat 548..593 CDD:276965 21/44 (48%)
Klhl28NP_001100205.1 PHA03098 35..553 CDD:222983 227/527 (43%)
KELCH repeat 321..372 CDD:276965 14/51 (27%)
KELCH repeat 376..419 CDD:276965 21/42 (50%)
KELCH repeat 423..465 CDD:276965 21/42 (50%)
KELCH repeat 469..513 CDD:276965 17/43 (40%)
KELCH repeat 516..559 CDD:276965 20/42 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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