DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and Ipp

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001100149.2 Gene:Ipp / 298439 RGDID:1306299 Length:584 Species:Rattus norvegicus


Alignment Length:579 Identity:214/579 - (36%)
Similarity:321/579 - (55%) Gaps:30/579 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SHTSEKHPKVTLTELNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQTE 112
            |.:|:||.::.|.::|.:|..:..|||.|.||......||::|:|.|.||.|:|||.::||.:..
  Rat    13 SFSSDKHAQLILAQMNKMRTGQHFCDVQLQVGKETFQVHRLVLAASSPYFAALFTGGMKESSKDV 77

  Fly   113 VTIRDIDENAMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGI 177
            |.|..::....:||:||.||..:.:..||||.|:.||.:|||.|:.::||:|||.|:||.||:|:
  Rat    78 VQILGVEAGIFQLLLDFIYTGLVNIAVSNVQELIVAADMLQLTEVVNLCCDFLKGQIDPQNCIGL 142

  Fly   178 RAFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSW 242
            ..|::..:|.:||...:.:...:|.||...||||.|...||:.|:.|:||::..|.|||.|.|.|
  Rat   143 FQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIRILRSEELSIEDEYQVFLAAMQW 207

  Fly   243 LKYNVAERRQHLAQVLQHVRLPLLSP----KFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQE 303
            :..::.:||:|:.:||..||.|||..    |::.|....:|.|......::..:..|:    |:|
  Rat   208 ILKDLGKRRKHVVEVLDPVRFPLLPSQRLLKYIEGVSDFNLRVALQTLLKEYCEVCKS----PKE 268

  Fly   304 R---PLMQGPRTRPRKPTRRGEVLFAVGG--------WCSGDAIASVERFDPQTNDWKMVAPMSK 357
            .   ..:|..:.||||..|:  .|:||||        |....|::.|||||..:..|..|:.:.:
  Rat   269 NKFCSFLQTSKARPRKKARK--YLYAVGGYTRLQGGRWSDSRALSCVERFDTFSQYWTTVSSLHQ 331

  Fly   358 RRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAV 422
            .|||:|||||..::||:||.......:..|.|||.|.||: .||.....|..:||.|..|.:||:
  Rat   332 ARCGLGVAVLGGMVYAIGGEKDSMIFDCTECYDPVTKQWT-TVASMNHPRCGLGVCVCYGAIYAL 395

  Fly   423 GGQDGVQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGG-SDGQCPLNTVERYDP 486
            ||..|.:..:.:||:||.||||..|..|...|.......:.|.:||:|| |:....|.:.|.|||
  Rat   396 GGWVGAEIGDTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYAVGGISNEGLELRSFEVYDP 460

  Fly   487 RHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCME-LSSAERYNPLTNTWSPIVAMTSRRSG 550
            ...:|..:.||.|||.:||.|..|:.|||:||.::..: |.:.|:|:.....|..:.:|...|:|
  Rat   461 LSKRWSPLPPMGTRRAYLGVAALNDCIYAIGGWNETQDALHTVEKYSFEEEKWIEVASMKVPRAG 525

  Fly   551 VGLAVVNGQLYAVGG------FDGSAYLKTIEVYDPETNQWRLCGCMNYRRLGGGVGVM 603
            :.:..|||.||..||      |.....|.::|||:|.::.|...|.|...|..|||.|:
  Rat   526 MCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 54/126 (43%)
PHA03098 69..587 CDD:222983 200/540 (37%)
KELCH repeat 359..403 CDD:276965 21/43 (49%)
KELCH repeat 407..451 CDD:276965 19/43 (44%)
KELCH repeat 454..497 CDD:276965 13/43 (30%)
KELCH repeat 501..545 CDD:276965 14/44 (32%)
KELCH repeat 548..593 CDD:276965 18/50 (36%)
IppNP_001100149.2 BTB_POZ_KLHL27_IPP 17..141 CDD:349565 53/123 (43%)
PHA03098 34..575 CDD:222983 202/547 (37%)
KELCH repeat 333..376 CDD:276965 21/43 (49%)
KELCH repeat 380..424 CDD:276965 19/43 (44%)
KELCH repeat 427..473 CDD:276965 15/45 (33%)
KELCH repeat 475..520 CDD:276965 14/44 (32%)
KELCH repeat 523..574 CDD:276965 18/50 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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